KEGG   Mangifera indica (mango): 123204486
Entry
123204486         CDS       T07684                                 
Name
(RefSeq) histone deacetylase 6
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
minc  Mangifera indica (mango)
Pathway
minc03082  ATP-dependent chromatin remodeling
minc03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:minc00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    123204486
   03083 Polycomb repressive complex
    123204486
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:minc03036]
    123204486
Enzymes [BR:minc01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     123204486
Chromosome and associated proteins [BR:minc03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     123204486
   HDAC complexes
    Sin3A-HDAC complex
     123204486
    BRAF-HDAC complex
     123204486
    REST complex
     123204486
    SHIP complex
     123204486
    MiDAC complex
     123204486
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     123204486
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    123204486
  Chromatin remodeling factors
   NuRD complex
    123204486
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 123204486
NCBI-ProteinID: XP_044477094
LinkDB
Position
20:complement(3920916..3924588)
AA seq 458 aa
MEEGASLPSGPDGKKRRVSYFYEPTVGDYYYGQGHPMKPHRIRMAHNLIVHYALHRRMEV
NRPFPADPSDIRRFHSDEYVDFLASVSPESCGDPSFSRQLKRFNVGEDCPVFDGLFGFCQ
ASSGGSIGAAVKLNRGDADIALNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHKRVL
YVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIKDVGFGQGKNYALNVPLNDG
LDDESFRHLFRPIIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSF
NVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLHVEPCNME
NLNTAKDMERIRVTLLEQLSRLSHAPSAPFQSTPPISEVPEEPEEDMEQRPKPRIWSGED
YASDHEEDEKPPHKMIKVEMRDGPDDMEEDKSGDHLSC
NT seq 1377 nt   +upstreamnt  +downstreamnt
atggaggagggtgcgtcgctgccatcaggtcccgacggcaagaagcgtcgcgtcagctac
ttctacgaacctacggtcggagactattactacggccagggtcacccaatgaagccacac
agaattcgcatggctcataatctcatcgtccactacgctctccaccgtcggatggaggtc
aaccgtcctttccctgctgatccctctgacatccgcagattccacagtgacgaatatgtt
gatttcttggcctccgtctcacccgaatcttgcggtgacccgtcgttttcgagacagttg
aaacggttcaacgttggggaagattgtcccgtgtttgatgggctttttgggttctgtcag
gcctcttcaggcggctccattggagctgctgtcaagttgaatagaggtgacgctgatatt
gctttgaattgggccggtggtcttcaccatgctaagaagagtgaagcttctgggttttgt
tatgttaatgatattgttcttgggattctcgagttgcttaaggttcacaagcgtgtgtta
tatgttgatattgatgttcaccatggagacggtgttgaagaggcattttacaccactgat
agagtcatgacagtttctttccataaatttggggatttctttcctgggactgggcatatc
aaggatgttgggttcgggcaaggtaaaaactatgccttgaatgtcccactgaatgatggc
ttggatgatgaaagttttcgtcatctgtttcggcccatcatccaaaaggtcatggaagtg
tatcaacctgatgcagttgttctccagtgtggagcagattcactgtctggtgataggttg
ggctgctttaacttgtcagtaaaaggccatgcagactgccttcgcttccttagatccttc
aacgtacctctgatggtcttgggtggtggaggatataccatccggaatgttgctcgatgt
tggtgctatgagactgcagttgcagttggggttgaacctgataataaattgccttacaac
gaatattatgagtattttgggccagattacactcttcatgttgaaccatgcaacatggag
aacctgaacacagccaaagacatggagagaataagagtgacactacttgaacaactttct
aggttatctcatgctcccagtgcaccttttcagtctacaccaccaatttcagaagttcca
gaagagcccgaagaggacatggagcaaagaccaaaacctcgcatttggagtggtgaggat
tatgcttcggatcatgaggaagatgagaagcctccacacaaaatgataaaagttgagatg
agggatggtcctgatgatatggaagaagataaatcgggagatcatctatcatgttga

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