Mangifera indica (mango): 123204511
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Entry
123204511 CDS
T07684
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A-like isoform X1
KO
K03267
peptide chain release factor subunit 3
Organism
minc
Mangifera indica (mango)
Pathway
minc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123204511
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
minc03019
]
123204511
03012 Translation factors [BR:
minc03012
]
123204511
Messenger RNA biogenesis [BR:
minc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
123204511
Translation factors [BR:
minc03012
]
Eukaryotic type
Release factors
123204511
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
G-alpha
Motif
Other DBs
NCBI-GeneID:
123204511
NCBI-ProteinID:
XP_044477138
LinkDB
All DBs
Position
20:12242897..12252437
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AA seq
532 aa
AA seq
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MDIEEDIRALQLDSAAEENNGVPNPERAKPEVVDKDDKMEEAIMHGRTLKWVEITLETNF
LQYPKEEVHTISHAINPEPKVKDKEISAPQDVELEEAEVTKKRHLNVVFIGHVDAGKSTT
GGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERIKGKTVEVGRAHFETE
TTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGYEKGGQTREHVMLAKTL
GVSKLLIVVNKMDDHTVNWSKERYDEIETKMIPFLKSSGYNVKKDVQFLPISGLIGTNMK
TRVQKSVCPWWNGPCLFEALDAIEVPSRDPKGPFRMPIIDKFKDMGTVVMGKVESGSVCE
GDSLLVMPNKAQVKVIAVYCDEDKVRCAGPGENLRVRLAGIEDEDIISGFVLSSVARPIV
AVTEFVAQLQILELLDNAIFTAGYKAVLHIHSIVEECEIVELLQQIDPKTKKPMKKKVLF
VKNGAVVVCRVQVNNLICIEKFSEFPQLGRFTLRTEGKTVAVGKVTDLCASA
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atggatattgaggaggatatccgtgcattacagcttgattcagcagcagaagagaataat
ggggtgcccaatcctgaaagggcaaagcctgaagtagttgataaggatgataagatggag
gaagcaatcatgcatggtagaactcttaaatgggtggagattactttagaaaccaacttc
cttcaatatccaaaggaggaggtgcacacaatttctcacgctattaatcctgagccaaaa
gtgaaagacaaggaaatatctgcaccacaggatgttgaactggaggaggctgaagtaact
aagaagcgacacttgaatgttgtatttattggtcatgttgatgctggtaagtccacaacc
ggaggtcaaatactattccttagtggtcaggttgatgaccgtacaatccaaaagtatgag
aaagaagcgaaggacaaaagtagggaaagctggtatatggcatatattatggacactaat
gaagaggagaggatcaagggtaaaacagtagaagttggaagagcacactttgaaacagag
acaactaggtttacaattttggatgcacctggtcacaagagttatgttccaaatatgatt
agtggggcatctcaagctgatattggagtactggtaatatcagctagaaaaggagaattt
gaaactggatatgagaaaggtggacagacccgtgaacatgtgatgctggctaaaaccttg
ggtgtctctaagctgctcattgttgtgaacaaaatggatgatcataccgtgaactggtca
aaagagaggtatgatgaaattgagacaaagatgataccattcttaaagtcctcagggtac
aatgtgaagaaagatgtccagtttcttccaatctctggtttgattggcacaaatatgaaa
acaagagtacaaaaaagtgtatgcccatggtggaatggtccttgtctctttgaagccctt
gatgccattgaggttccttcacgagatcctaaaggtccatttaggatgcctataattgac
aaattcaaagatatgggaactgttgtgatgggaaaagtagaatccggtagtgtgtgtgaa
ggtgattccttgttggtcatgccaaataaggctcaagtaaaagttattgctgtatactgt
gatgaagataaggttaggtgtgcggggcctggcgaaaatctacgagtgagattggctggg
attgaagatgaggatataatatctggttttgtcctgtcaagtgttgccagaccgatagtt
gcagtcactgaatttgttgcccagttacagatccttgagctgctggacaatgcaattttt
actgctggctataaggctgtcttgcacattcattctattgttgaggaatgtgagattgtt
gagctattacagcaaattgatccaaagacaaagaaacccatgaaaaagaaagttctcttt
gtgaagaatggtgccgttgttgtatgccgcgttcaggtgaataacttgatatgcattgag
aagttctcagagtttccacagcttggaaggttcactcttcgtacagaaggaaaaactgtg
gcagtgggaaaagtgaccgatctttgtgctagtgcataa
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