KEGG   Mangifera indica (mango): 123204635
Entry
123204635         CDS       T07684                                 
Name
(RefSeq) methyl-CpG-binding domain protein 4 isoform X1
  KO
K10801  methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
minc  Mangifera indica (mango)
Pathway
minc03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:minc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    123204635
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:minc03036]
    123204635
   03400 DNA repair and recombination proteins [BR:minc03400]
    123204635
Chromosome and associated proteins [BR:minc03036]
 Eukaryotic type
  Heterochromatin formation proteins
   MBPs (metylated DNA binding proteins)
    123204635
DNA repair and recombination proteins [BR:minc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     123204635
SSDB
Motif
Pfam: HhH-GPD FXR_C1
Other DBs
NCBI-GeneID: 123204635
NCBI-ProteinID: XP_044477338
LinkDB
Position
20:11675780..11679266
AA seq 386 aa
MEDSEEDLPKYAKKSTKRKQNRREREYEASSSPATKRKRRKARVVSRFFQIQPSSSAAET
NKRKKTKSVIDGKDVNFVTGDGFCSVFDNSQEKRINTNVLCGDWCGKRRAERSRRRRTAE
ETVVKTESNFGDAPSPEDVLSQLIYQGITNREIKPLEKKENEKKACLEDSLPPIYEGLGE
EQVGNSCLKIAREVEVRKVSPYFMNGCKASKLKVKRIKVSPYFQKPDSCDYQKFDEAYER
KSLDNTWKPPRSEHGLLQEDHYHDPWRVLVICMLLNRTSGTQARRVISELFTLCPDAKTA
TEVAPEEIEKIIQTLGLQKKRALMIQRFSQEYLWEDWTHVTQLHGIGKYAADAYAIFCTG
KWDRVRPSDHMLNYYWEFLDSIKSSL
NT seq 1161 nt   +upstreamnt  +downstreamnt
atggaagattcagaagaggatttgcccaagtacgctaagaaatctacgaaaaggaagcag
aatagaagagaacgagaatatgaagcgtcctcatctcctgccacaaagagaaagcgtaga
aaggcccgagttgtttctcggttttttcagatacaaccctcgagttcggcggctgagaca
aataaacggaagaaaacaaagagtgtgatcgatgggaaagacgtgaattttgttactgga
gatgggttttgttccgtctttgataactcacaggagaagaggattaatactaatgttctt
tgcggtgactggtgtggaaagagaagagcggagcggtccagacggcggagaaccgcggag
gagacggtggtgaagacggagagtaatttcggtgatgctccaagtcctgaggacgtcctg
tctcagttaatttaccagggaattactaatcgggaaattaaacccttggagaagaaagag
aatgagaagaaagcttgtttagaagattctttaccaccaatttatgaaggcttgggagaa
gaacaagttggaaatagttgtttgaaaattgcaagggaagtagaagtgagaaaggtttca
ccttattttatgaatggctgtaaagcttcaaagttgaaggtgaaacgcataaaggtttca
ccttactttcagaagcctgattcttgtgattatcagaagtttgatgaggcttatgaaaga
aaaagtttggataatacttggaagcctcctcgatcggagcatggtcttttacaagaggat
cattatcatgatccttggagggttttggtcatatgtatgcttctcaaccgcacgtctggc
actcaggctagaagagtaatatcagaacttttcactctgtgtcctgatgcaaagactgca
actgaggttgcccctgaggagattgaaaagattatacaaactctaggtcttcaaaagaag
agggcactgatgatacaacgattctcacaggagtatttatgggaggactggacacatgta
actcagcttcatggtattggaaagtatgcagccgatgcatacgcaattttctgtacaggg
aagtgggatcgggtgagaccttctgatcacatgttaaattattactgggaatttcttgat
agtatcaaaagttcgttgtga

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