Mangifera indica (mango): 123205072
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Entry
123205072 CDS
T07684
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase HRD1B-like
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
minc
Mangifera indica (mango)
Pathway
minc04120
Ubiquitin mediated proteolysis
minc04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
123205072
04120 Ubiquitin mediated proteolysis
123205072
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
minc04121
]
123205072
Enzymes [BR:
minc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123205072
Ubiquitin system [BR:
minc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
123205072
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_3
FlxA
zf-ANAPC11
zf-RING_16
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
123205072
NCBI-ProteinID:
XP_044477822
LinkDB
All DBs
Position
Unknown
AA seq
534 aa
AA seq
DB search
MRLPTYAGCSLTLAIAVIYHAFSSRKQFYPAMVYLSTSKISLVLLLNMGLVVMCVLWQMI
KRFFLGTLREAEIERLNEQSRREIMEILFAITIFRQDFSVSFLAMVTTLLMIKALHWLAQ
KRVEYIETTPTVSKLSHVRIVSFMGFLFLLDSMFLYSSVKFLIQTRQASVSLFFSFEYMI
LATTTVSIFVKYIFYVSDMLMEGQWERKAVYTFYLELVRDLLHFSMYLCFFLVIFMTYGV
PLHLIRELYETFRNFRIRLADFVRYRKITSNMNDRFPDATPEELNASDSTCIICREEMTT
AKKLICGHLFHVHCLRSWLERQHTCPTCRAPVVPPEGGANTAEGQHGPRSDAHQSGTGTS
TAARGSADASADNNLSQHQARLQAAALAASIYGKSFVYPSPNSLVCSPGYVVLPQSYRPS
GDSTNVESHGEQASSGQQQFQNPRASVFFPFAQFPQSFVPFQAPGANVTFGERLEAQKFI
KHQIEVLQDQLQQLQKSKPVVSSEKDSSKLFDGKGKTVASSSLSVSDCGHHCEN
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgaggctgccaacgtacgcggggtgtagtttaacgcttgctatagcagttatataccat
gcttttagtagtagaaaacagttttatccagctatggtttatttgtctacttctaagatc
agtttggtgctgcttctgaatatgggtttggtggtaatgtgtgttttgtggcaaatgatc
aaacgttttttccttggcacactccgggaagcggagattgagagattgaatgagcagtct
aggagagagatcatggagattctgtttgcaattactatatttcggcaggacttttcggtt
tcatttcttgctatggttactacattgttgatgatcaaagctttgcattggctggctcag
aagagggtggagtacattgagacaaccccaactgtctccaagttgtctcatgttaggatt
gtttcttttatgggtttcctttttcttttggattctatgtttttgtatagttctgttaag
ttcttgatacaaacacgacaggcttccgtttctctctttttttcatttgagtacatgata
ctggcaacaacaacagtgtcaatatttgtgaaatatattttctatgtgagtgacatgctt
atggaaggacaatgggaaagaaaggctgtgtacaccttctacttggaacttgtccgggac
ttgcttcatttttctatgtacctgtgcttctttcttgtgatattcatgacctatggtgtt
cctttgcacttaatacgagagctttatgagacattcaggaatttcagaattcgtcttgct
gattttgtacgttatcggaagatcacttcaaatatgaacgatcgatttccagatgctacc
cctgaagagcttaatgcaagtgattcaacctgcattatatgccgtgaggagatgacaacg
gccaagaaactaatttgtggacatctttttcatgttcattgcctccgctcatggttagaa
cgacaacatacctgtcctacttgcagagctccggttgtaccacctgaaggtggggcaaat
acagctgaaggacaacatggaccacgatcagatgctcatcaatcaggtacgggcacttca
acggctgcccggggttcagctgatgcttcagctgacaacaacttgagccagcaccaggcc
aggctccaggctgccgcgttggctgcttcaatatatgggaaatcttttgtttatccatct
ccaaactctctagtgtgttctcctggatatgttgtacttcctcagtcctataggccgtcg
ggtgattccaccaatgtggaatctcatggtgaacaagcttccagtggacaacagcagttt
cagaatcctagggcatctgttttttttccctttgctcaatttccacagagtttcgtccct
tttcaggcacctggtgctaatgtgacatttggagaaagattggaagctcagaagttcatc
aagcaccagattgaggtcttgcaagaccagcttcaacaactgcagaagtcgaaacctgtg
gtaagttctgagaaggattcttctaaattatttgatggcaaaggaaagactgttgcttca
tcttcattgtcagtttcagactgcggtcatcactgtgaaaattaa
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