Mangifera indica (mango): 123205286
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Entry
123205286 CDS
T07684
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 1 homolog
KO
K10683
BRCA1-associated RING domain protein 1
Organism
minc
Mangifera indica (mango)
Pathway
minc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
123205286
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
minc03019
]
123205286
04121 Ubiquitin system [BR:
minc04121
]
123205286
03036 Chromosome and associated proteins [BR:
minc03036
]
123205286
03400 DNA repair and recombination proteins [BR:
minc03400
]
123205286
Messenger RNA biogenesis [BR:
minc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
123205286
Ubiquitin system [BR:
minc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
123205286
Chromosome and associated proteins [BR:
minc03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
123205286
DNA repair and recombination proteins [BR:
minc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
123205286
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
BRCT_2
zf-HC5HC2H
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-C3HC4_4
zf-RING_6
zf-HC5HC2H_2
zf-RING_5
RTT107_BRCT_5
zf-RING_10
zf-rbx1
zf-Nse
LIG3_BRCT
AARP2CN
Motif
Other DBs
NCBI-GeneID:
123205286
NCBI-ProteinID:
XP_044478146
LinkDB
All DBs
Position
Unknown
AA seq
1001 aa
AA seq
DB search
MEDPRTQLERMGRELKCPICLSLLNSSVSLTCNHVFCNSCIMKSMKSSSNCPVCKVPYRR
REVRAAPHMDNLVGIYKSMEVASGVNIFVTQNEPSIMSLDREKGVEGSHTCSELATSKNC
QETSKRKGSGRKNKTNLDISGPDAVKPSFPNKKRVQVAKYPLPETPEQLAKFKDELVNNS
SIQLKDSSVDLREKSFLNEKGPVLQPFFWLREEVDEEMSTQQSDRDAYITPPEIPSFSDI
MDSYDKSSPQLSPTAETHHRTGDVDYFDSEMFEWTQRPCSPELLPSPIKTQVADSDASDH
YKEKNLEAASHVENEQHIENVKLNSGKGNGIRDKGFPQSSPRSIDINHQIGNSKLGKRGM
KAHNVAKRAKRDKVRGSKIQSNLREECVKVAQHVNDCNGGSSVLKTRSEKLVLGNCATKP
EDPDVLVPDRAEIPDQGGKKGLSELPASFGKKQGSDEEFNLKKTRTTSQKINGRNFLRSK
RQNKGSAEVNVLEKVSAVQDQTNEDAVPKSSFKSVCLVDDKETCAPKEKTSRKAPKKRKT
VSFSGMLKGGSIDDNLEVHSNDSAKGIPSTETVKGDHDFRFLDDSSRVKKVLYKGGMTLS
KCETLPNKIQCSFCHSSEDTEATGDMIHYYNGRPVAADYNSGSKVIHSHRNCTEWAPNVY
FEDDTAINLEAEIARSQRLKCCCCDLKGAALGCYEKSCRKSFHVPCAKLISQCRWDTDNF
VILCPLHASSKLPNENSGPQGNRKKCNATRQLHPRCNQVVIENDTNKSYNWNSSQKKLVL
CCSALTGAERGIVSEFERLSKATVLKTWDSRVTHVIASTDENGAGRRTLKFLMGILEGKW
ILNIEWVKASLKAMKPLNEEKYEIAIDMHGIRGGPRLGRQRVMNKLPKLFDGIKFYFMGG
FESSYKRYLQELIVVAGGTILHRKPISRDQELSSDSSTSATTFIIYSLELLDKCDLAKKT
MILNCRQSEADALANATGAKAVSNSWVLNCIAACKFQSYEH
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atggaagatccaagaactcagctagagagaatgggccgagaactcaagtgtcctatttgc
ttgagtttgctgaattcttctgtttcactcacatgcaatcatgtattctgcaattcatgc
attatgaaatcgatgaagtccagttccaattgtcctgtttgtaaagtgccctatcgtcgt
agagaggttcgtgctgctcctcacatggataacttggtgggcatctataaaagcatggaa
gttgcttctggtgtcaatatatttgtcacacagaatgaaccatcgattatgtcattagat
agagaaaagggagttgaaggctctcacacatgtagtgagctagctacaagtaagaattgt
caggaaacatccaaaagaaaagggtcagggagaaaaaataaaaccaatttggatatttct
ggccctgatgctgtgaagccgtccttcccaaacaagaaaagggttcaggttgccaagtat
cctcttccagaaaccccagaacagcttgcaaagttcaaagacgaattggttaataacagc
agcattcaattgaaggacagctctgttgatttgagggaaaaatcttttttaaatgaaaaa
ggaccagtgcttcaacctttcttttggttgagagaggaagtggatgaagagatgtcaact
cagcagtcagacagggatgcatatataacaccaccagagattccttctttcagtgatata
atggattcatatgataaaagttctcctcaattgtccccaacagcagaaacgcatcataga
actggtgatgtggattactttgatagtgagatgtttgaatggactcaaaggccttgctcc
cctgaacttcttccaagtcctattaagacacaggtggccgacagtgatgctagtgatcat
tataaagagaagaatttagaagcagcttcacatgttgaaaatgaacaacacattgagaac
gttaaattgaactctggaaaaggaaatggaattagagataagggttttccccaatcctct
cctagaagcatagatattaaccatcaaattggaaatagtaaattgggtaagagaggtatg
aaagcacataatgtagccaagcgtgcaaagagagataaagttcgaggttccaaaattcaa
tcaaatttaagggaggaatgtgtaaaggttgcacagcatgtaaatgactgtaatggcggt
tcctcagttttgaagactaggagtgagaagcttgtcttgggtaactgtgcaaccaagcct
gaagatccagatgttcttgttcctgatagagctgaaattcctgaccagggtgggaaaaaa
gggttgtctgagttgcctgcttcatttggtaagaagcaaggcagtgacgaggaatttaat
ttgaaaaagactagaacaaccagccagaagatcaatggtcggaactttttgaggtcaaag
cggcaaaataagggttctgctgaggtcaatgtgcttgaaaaagtttctgcagttcaagac
caaacaaatgaagatgcagttcccaaatcatcatttaaatctgtttgtctggtagatgat
aaagaaacctgtgctcctaaggaaaaaactagcaggaaagctcccaagaaaaggaagaca
gtttcttttagtggcatgttgaaaggtgggtcgattgatgacaatttagaggtccatagc
aatgattctgcaaagggaattccatcaacagaaactgttaagggcgatcatgactttaga
tttcttgatgattcatcaagagtgaaaaaggttctttacaaaggaggaatgacattatct
aaatgtgaaacccttcctaacaaaattcaatgttcattctgtcattcttcagaagacaca
gaggctacaggagatatgatccactactacaatggcaggcctgttgctgcagactacaat
agtggatccaaggtcatacattcccacagaaactgcacggaatgggcccctaatgtttat
tttgaagatgacactgctattaatcttgaagctgaaatagctagaagccagagactaaaa
tgttgctgctgtgatctcaaaggtgcagcacttgggtgttatgagaagagttgccgtaag
agttttcatgttccttgtgcgaagcttatctcacaatgtcgatgggatactgacaacttt
gtaatcttatgccctcttcatgcctcttctaagctgcctaatgagaattctggacctcaa
ggaaacagaaagaagtgcaatgcaacaagacaattgcaccctcgatgcaatcaagttgtt
attgaaaatgatactaataaaagttacaactggaattcctcacaaaagaagttggtcctt
tgttgttcagctcttacaggagcagagaggggaattgtttctgagtttgagagattatca
aaagcgacagtgttgaaaacatgggattcacgtgtcacccatgtcattgcatcaacagat
gagaatggagcaggcagaagaaccctaaaatttctaatgggtatcttggaggggaaatgg
atactgaatattgagtgggtgaaggccagcttaaaagccatgaaacctcttaatgaggag
aaatatgaaattgctattgatatgcatggaatcaggggtggtccccgattaggaagacag
agagtcatgaacaagctaccaaagctttttgatggaataaagttttatttcatgggaggg
tttgaatcttcctataagagatatttgcaagaacttatagttgttgccggaggaactatt
ctacatcgtaaacctatttcaagagaccaagaactctcgtctgattcatctacatctgcc
acaaccttcataatttacagccttgagctgctagataaatgtgatctcgccaagaagact
atgattttgaactgcaggcaatcagaagcagatgcactagcaaatgcaactggagctaaa
gcagtaagcaactcttgggttttgaattgcattgcagcctgcaaatttcaaagttatgaa
cactaa
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