Mangifera indica (mango): 123205292
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Entry
123205292 CDS
T07684
Name
(RefSeq) DNA damage-binding protein 1a-like
KO
K10610
DNA damage-binding protein 1
Organism
minc
Mangifera indica (mango)
Pathway
minc03420
Nucleotide excision repair
minc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
123205292
09124 Replication and repair
03420 Nucleotide excision repair
123205292
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
minc04121
]
123205292
03400 DNA repair and recombination proteins [BR:
minc03400
]
123205292
Ubiquitin system [BR:
minc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
123205292
DNA repair and recombination proteins [BR:
minc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
123205292
TCR (transcription coupled repair) factors
Cul4-CSA complex
123205292
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_2nd
Beta-prop_RSE1_1st
CPSF_A
Motif
Other DBs
NCBI-GeneID:
123205292
NCBI-ProteinID:
XP_044478152
LinkDB
All DBs
Position
Unknown
AA seq
1088 aa
AA seq
DB search
MSIWNYVVTAHKPTNVTHSSVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYG
RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVFDRIGRPTDNGQI
GIIDPDCRLIGLHLYDGLFKVIPFDSKGQLKEAFNIRLEELQVLDIKFLYGCSKPTIVVL
YQDNKDARHVKTYEVALKDKDFAEGPWYQNNLDNGADLLIPVPPPLCGVLIIGEETIVYC
SANTFKAIPIRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGET
SIASTISYLDNAFVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLE
RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVS
FISETRILAMNLEDELEETEIEGFCSQAQTLFCHDAVYNQLVQVTSSSVRLVSSTSRELR
HEWKAPAGYSVNVATANATQVLLATGGGHLVYLEIDDGTLTEIKHAQLEYEISCLDINPI
GENPNYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCAL
GDGHLLNFLLNMNTGELTDRKKVSLGTQPITLRTFSSKSTTHVFAASDRPTVIYSSNKKL
LYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHARRICH
QEQSRTFAICSLKNQSSADESEMHFIRLLDDQTFEFMSTYPLDTFEYGCSILSCSFSDDS
NVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAIN
QKIQLYKWMLRDDGSRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGA
IEERARDYNANWMSAVEIVDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLG
EFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQSNLRKVI
KGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRSRMDEISKTMNVSVEELCKR
VEELTRLH
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atgagtatttggaactacgtcgttacggctcacaagcccaccaatgttactcactcttct
gtcggcaatttcaccagccctcaggagctcaatctcattattgcgaaatgcactcgtatt
gaaatacatttgcttactcctcagggactgcagcctatgttggatgtacccatatacgga
agaattgcaactcttgaactttttcgccctcatggtgaagcacaggattttctattcatt
gcaactgaaagatacaaattctgtgttctccagtgggatgctgagtcctctgagcttatt
acaagagcaatgggagatgtctttgatcgtataggccgtcctacagataatggtcagatt
ggcataattgatcctgattgtagattgattggactccatctgtatgatgggttgttcaag
gttattcctttcgatagtaaaggacagctaaaggaagcctttaatattaggcttgaggag
cttcaggtcttggatatcaagtttctttatggttgttcaaaaccaacaattgtagtgctc
taccaggataataaagatgctcgtcatgtcaaaacgtacgaggttgctctgaaagataaa
gattttgctgagggcccgtggtaccagaataatttggacaatggagctgatttattgata
ccagtacctccacctctctgtggtgttcttataattggagaagaaacaattgtctattgt
agtgctaatacttttaaagcaattccaataagaccatctatcacaaaagcctatggaaga
gttgatgctgatggttctaggtatctacttggtgaccatgctggcctgcttcacctgctg
gttataacccatgagaaagagaaggtcactggactaaaaatcgagctgttgggcgaaaca
tctattgcatctactatatcatatttggataatgcatttgtgtatattggctcaagctat
ggagattcacagcttataaagctaaatctacaacctgatgcaaagggttcatatgtggaa
gtattagaaaggtatgtcaacttggggcccattgttgacttctgtgtggttgaccttgag
aggcaaggccaaggtcaggttgtaacatgctctggagcttacaaggatggttctcttcgc
atagttcgaaatgggattggaataaatgaacaggcatcagtggaattgcaaggtattaaa
gggatgtggtctttgagatcatccaccgatgatccatttgataccttcctggtggttagt
tttatcagtgaaacacggattttagcaatgaatctggaggatgagctggaagagactgag
atagagggtttttgttctcaagcacagactttgttttgccatgatgctgtttacaatcaa
cttgttcaggttacttctagctctgtaagacttgtaagttcgacatctagggagctgcgc
catgaatggaaagctccagcaggatattcagttaatgttgcaactgccaacgctactcag
gttttactggcaaccggaggtgggcatttggtttatttagaaattgatgatggaacattg
acagaaataaaacatgcacaactggagtatgagatatcatgccttgacattaatccaatt
ggtgagaaccccaactatagtcagatagctgcagttggaatgtggacagatataagtgtt
aggatattctcacttcctgacctaaatctgatcactaaggagcatctgggtggagaaatc
atacctcgatctgttcttctctgtgcctttgaagggatatcttacttgttatgtgcactt
ggagatggtcatcttttaaattttttgttgaacatgaatactggtgagttgacggatagg
aaaaaagtgtcgctgggaacccaacctattacactccgtactttctcatccaagagtacc
actcatgtatttgctgcatcagacagaccgacggtgatttatagcagtaacaaaaagcta
ctttatagtaatgtaaatttgaaagaagtcagtcatatgtgccctttcaactctgctgcc
tttccagacagccttgcaattgcaaaagaaggtgagcttactattggcacaattgatgat
atccagaagcttcatatccgctctatacctcttggggagcatgcacgccgtatctgtcat
caagagcagtcccggacttttgctatctgtagtttgaagaaccagtctagtgcggatgaa
tctgaaatgcacttcatccgcctgttagatgaccaaacatttgagtttatgtcaacttac
ccacttgacacatttgagtacggttgctccatcctcagctgctctttctctgatgatagt
aatgtttattactgtgttgggactgcctatgttctgccagaagaaaatgagcctaccaag
gggaggatattggttttcatagtggaagatgggaagttacagctgattgcagagaaggaa
actaagggagcagtttattcattgaatgccttcaatggtaaattgcttgcggctatcaat
caaaaaatccagttatacaagtggatgctccgagatgatggtagtcgggaattgcaatct
gaatgcggtcatcatggtcacatacttgccctctatgtacaaactcgtggagatttcatt
gttgttggtgatttgatgaaatctatttccttgctaatctacaagcatgaagaaggtgcc
attgaagaacgggctcgtgactacaacgcaaattggatgtcagccgttgaaattgttgat
gatgacatataccttggtgctgaaaacaactttaacctctttacagttaggaagaatagt
gaaggtgccactgatgaggagcgaggccgccttgaggtggttggtgaataccacctggga
gaatttgtgaatcgatttcggcatggttcccttgtgatgcgattgccagattctgatgtg
ggtcagattccaactgtgatatttgggacggtgaatggtgttattggggttattgcttca
cttcctcacgagcagtaccttttcttagagaagctgcagtcaaacttaaggaaggtgata
aagggtgtgggagggttgaatcatgagcaatggagatcattcaacaatgagaagaaaaca
gtggatgcaaaaaatttcctggatggtgatttaatagagtcgttccttgatctgagccgt
agtcggatggatgaaatttcgaagacgatgaatgtttcagtagaggagctgtgtaagaga
gttgaggaactcacaaggttgcattga
DBGET
integrated database retrieval system
