Mangifera indica (mango): 123205540
Help
Entry
123205540 CDS
T07684
Name
(RefSeq) cryptochrome-1-like isoform X1
KO
K12118
cryptochrome 1
Organism
minc
Mangifera indica (mango)
Pathway
minc04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
123205540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
Cryptochrome_C
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
123205540
NCBI-ProteinID:
XP_044478457
LinkDB
All DBs
Position
Unknown
AA seq
683 aa
AA seq
DB search
MSGGGCSIVWFRRDLRVEDNPALAAGVRAGAVVAVFIWAPEEEGPFFPGRVSRWWLKHSL
AHLDSSLRSLGTCLITKRSTDSVSSLLEVVKATGATQLFFNHLYDPLSLVRDHRAKELLT
AQGIAVRSFNADLLYEPWEVNDAQGHPFTTFAAFWERCLSMPYDPDSPLLPPKRIISGDI
CRCPSDTLVFEDELEKGSNALLARAWSPGWSNADKALTTFINGPLIEYSKNRRKADSATT
SFLSPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNLFLKSIGLREYSRYMSFNH
PYSHERPLLGHLKFFPWVVDEGHFKVWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSS
FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDGREFDRIDNPQFEGYKFD
PNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVSIDAATARLQEA
LTEMWQQEAASRAAIENGTEEGLGDSSEAALIAFPGDIQMEENHEPARNNPPTTARCYED
QMVPSITSSLVRVEEEESSLDLQNSVEASRAEVPRNVNVNVNQEPRRDILNQGVPHTVHD
NNPLRQFNIAVGMRNAEDSTAESSSTSRRERDGGVVPVWAPPSSSFSEQLVGDENGIGTG
SSYLQRHPQSHQIMNWRRLSQTG
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtggtgggtgtagtatagtttggttcaggagagatctaagagtagaagataat
ccagcactggcagctggtgtgagagctggtgctgttgttgcagtttttatttgggctcca
gaagaagagggtcctttttttccggggagggtgtctagatggtggctcaagcacagtttg
gctcatctggattcttctttgaggagtcttggtacttgtctcatcaccaaaagatccact
gacagtgtttcttctcttcttgaggttgttaaagcaactggtgctactcagctcttcttc
aaccatttatatgaccccttgtctctggtaagggatcaccgtgcaaaggagcttttaact
gcacaaggcatagctgtgcgttcgtttaatgcggatctgctctatgaaccctgggaggta
aatgatgcacaaggccaccctttcacgacatttgctgcattttgggagagatgccttagc
atgccttatgaccctgattctccgcttctcccacctaagaggataatttcaggtgatata
tgtagatgcccttcagatacattagtgtttgaagatgaattggagaaagggagcaatgca
cttcttgcaagagcgtggtcacctgggtggagcaatgctgataaagctctcaccacattt
attaatgggcctttaattgaatactctaagaatcggagaaaggctgatagtgccacaacc
tcatttctttcaccgcacctgcattttggggaggtaagtgtgagaaaagtcttccatctt
gtccgcatcaagcaggtttcctgggccaatgaagggaacaaggctggtgatgagagtgtg
aatttgtttctcaagtcaattggtcttcgagaatattcaagatatatgagttttaaccat
ccttacagtcatgaaaggcctcttcttgggcaccttaaattctttccttgggttgttgat
gaaggccattttaaggtatggagacaaggtagaactggctatccactggtggatgctggc
atgagagagttgtgggccactggctggcttcatgatcggatacgtgttgtagtttctagt
ttctttgttaaggttcttcagcttccttggagatggggaatgaagtatttctgggatacc
cttttggatgcagatttagagagtgatgctcttggttggcagtacatatctggcactctt
cctgatggtcgtgaatttgaccggatagataatccacagtttgagggttacaagtttgac
cccaatggggaatatgtacgaaggtggcttcctgaacttgctcgactgccaactgaatgg
atacaccacccgtggaatgcaccggagtctgtactccaagctgctggcattgagcttgga
tccaattatcctctacccattgtgagtatagatgcagcaacagccaggttacaagaagca
cttactgaaatgtggcagcaggaagcagcttcaagagctgcaattgagaatggaaccgag
gaaggtcttggagactcatctgaagcggccctaattgcctttcctggagacatacaaatg
gaggaaaaccatgaacctgctaggaataatcctcctaccacagctcgttgttacgaggat
cagatggtcccaagcataacttcttctttggtgagagttgaagaggaagagtcttccttg
gatcttcaaaattctgtagaagctagcagagcagaagttccaagaaatgtgaatgtaaat
gtaaatcaagaacctagaagagacatattaaatcaaggggttccacatacagttcatgac
aataaccctttgcgacaatttaatattgcagtaggtatgcgaaatgctgaagactccacg
gctgaatcttctagtaccagtagaagagagagggatggaggggtggttcctgtttgggct
cctccatcttctagtttctcggagcagttagttggtgatgaaaatggcattggaacaggt
tcatcatacttgcagaggcatccacagtctcaccaaataatgaattggaggcggctttct
caaactgggtaa
DBGET
integrated database retrieval system
