Mangifera indica (mango): 123205582
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Entry
123205582 CDS
T07684
Name
(RefSeq) DNA polymerase delta catalytic subunit-like isoform X1
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
minc
Mangifera indica (mango)
Pathway
minc03030
DNA replication
minc03410
Base excision repair
minc03420
Nucleotide excision repair
minc03430
Mismatch repair
minc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
123205582
03410 Base excision repair
123205582
03420 Nucleotide excision repair
123205582
03430 Mismatch repair
123205582
03440 Homologous recombination
123205582
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
minc03032
]
123205582
03400 DNA repair and recombination proteins [BR:
minc03400
]
123205582
Enzymes [BR:
minc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
123205582
DNA replication proteins [BR:
minc03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
123205582
DNA repair and recombination proteins [BR:
minc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
123205582
MMR (mismatch excision repair)
DNA polymerase delta complex
123205582
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
DNA_pol_B_2
REV3_N
Motif
Other DBs
NCBI-GeneID:
123205582
NCBI-ProteinID:
XP_044478504
LinkDB
All DBs
Position
Unknown
AA seq
1093 aa
AA seq
DB search
MNGNNNNRRKRPPSTPAPHQPPSSKQQTVTPATSNVDEEFVDEDVFLDETLLPEDEESLI
LRDIKQRQAFASRLSKWARPPLSPFYVSQSQNIIFQQLDIDYVIGESHKELLPHSSGPAA
IIRIFGVTREGHSVCCNVHGFEPYFYISCPLGMGPDDISRFHKTLEERMRDANKNNKAPQ
FVRRIEMVQKRSIMYYQQQQSQPFLKIVVALPTMVASCRGILDRGIQIDGFGMKSFMTYE
SNVLFALRFMVDCNIVGGNWIEVPAGKYKKSAKIFSYCQLEFDCLYSELISHRPEGEYLK
MAPFRILSFDIECAGRKGHFPEPSHDPVIQVANLVTLQGENQPFIRNVMTLKSCSPIVGV
DVMSFDSEREVLLSWRDFIREVDPDVIIGYNICKFDLPYLIERAQTLGIVEFPMLGRIRN
SRVRVKDTTFSSRQLGTRESKEVTVEGRVQFDLLQVVQRDYKLSSYSLNSVSAHFLSEQK
EDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIFNYVEMARVTGVPISFL
LSRGQSIKVLSQLLRKAKQKDLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFA
SLYPSIMMAYNLCYSTLVMPEDARKLNLPPECVNKTPSGEIFVKANLQKGILPEILEELL
GARKRAKADLKEATDPFEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTSYG
RQMIEHTKKLVEDKFTMLGGYEHNAEVIYGDTDSVMVQFGVPTVEEAMNLGREAADYISG
TFLKPIKLEFEKVYYPYLLISKKRYAGLFWTNPKKFDKMDTKGIETVRRDNCLLVKNLVT
ECLHKILINRDVPGAVQYVKNTISDLLMNRMDLSLLVITKGLTKTGDDYEVKTAHVELAE
RMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDTQYYLDNQIAKP
ILRIFEPILKNANQELLQGSHTRSISITTPANCGIMKFAKKKLTCIGCKTLISEGTLCPH
CKGREAELYCKTVSHVSELEELFGRLWTQCQECQGSLHLDVLCTSRDCPIFYRRKKAQKD
MAEAMQQLDRWNF
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcaacaacaacaaccgccgtaagcggccgccgtcgaccccggcgccacaccaa
ccgccgtcttccaaacagcaaaccgtaacgccggcaacgtcaaacgtagatgaagaattt
gtcgacgaggacgtttttctcgacgaaaccctcctgccggaggatgaggaatctctcatc
ctccgcgatatcaagcagcgccaggcctttgcttctcggctttccaaatgggcccgccca
ccactttcccctttctatgtgtcacagtcacaaaacattatttttcagcaattggatatt
gattatgtgattggtgaaagtcataaagaattgttgccccattcatctgggcctgcggct
attatacggatatttggagtaacaagggaaggacatagtgtttgctgcaatgttcatgga
tttgagccatatttctacattagctgccctctaggaatgggcccagatgatatctcccgt
ttccacaagacccttgaggagaggatgagggatgccaacaagaacaataaggcaccccag
tttgttcgacgcattgaaatggtgcaaaaaagaagtattatgtattaccaacaacagcag
tcccaaccttttctcaagattgtggttgctctgcctaccatggttgcgagttgtcgtgga
attcttgatagaggcatacaaattgatggcttcggtatgaagagcttcatgacatatgaa
agcaatgttctatttgcccttcgtttcatggttgattgcaacattgttggtggcaattgg
attgaagtgcctgctggaaaatataagaagtcagcaaagattttctcctattgccaactg
gagtttgattgcctatattcagaattaattagccatcgccctgaaggtgaatacttaaaa
atggctcctttccgtatattgagttttgacattgaatgtgctggtcgtaaaggtcatttt
cccgagccttcccatgaccctgttatccaggtggctaatctagttaccttgcaaggagaa
aatcagccatttatccgtaatgtcatgacccttaagtcatgctctccaattgttggtgta
gatgtgatgtcttttgattctgaaagagaagttttactttcttggagggattttatccgt
gaagtggaccctgatgttataattggttataatatttgcaagtttgatttgccatatctt
attgagagagctcaaactttgggaatagttgagtttcctatgctgggccgcatcaggaac
agcagagtccgtgttaaagatacaactttttcttcacgacaattaggaacaagggaaagt
aaagaagttactgtagaagggagagttcaatttgatttgcttcaggtagtgcaacgagat
tataaactgagttcttactctctgaattctgtttcagctcactttctctctgagcagaaa
gaggatgtccaccattcaataatatccgaccttcagaatgggaatgctgaaacaaggagg
cggcttgctgtttattgtttaaaggatgcttatctcccacagagacttttggataaattg
atgttcattttcaactatgttgagatggctcgtgtcacaggtgttcctatatcttttcta
ctttccagagggcaaagcatcaaggtgctttctcaacttcttaggaaggctaagcagaag
gatcttgtgattccaaatgttaaacaggcaggatctgaacaaggaacatatgaaggtgca
accgtcttggaggcgagggcaggattctacgagaagccaattgcaacattagattttgct
tctttgtatccatcaattatgatggcttataatttatgttacagcactctggtgatgcct
gaagatgctcgcaaactcaatcttccacctgagtgtgtcaataaaactccctctggtgaa
atatttgttaaagcaaatttgcaaaagggaatacttcctgagattcttgaagaattatta
ggtgctcgtaaaagagcaaaggcagatttgaaggaagcaacggatccatttgagaaggct
gttctagatggtcgacaactggctttgaagataagtgcaaattctgtatatggatttacg
ggagctactgtcggtcagttaccatgtatagagatatcttcaagtgtcacaagctatggc
cgacaaatgattgaacacaccaagaaacttgtggaggataaatttacgatgctaggaggc
tatgaacacaatgcagaggttatatatggggatacagactctgtcatggtacaatttggt
gtacctacagtagaggaagctatgaatttagggagagaagctgctgattacatcagtgga
acttttctgaaacctatcaaactagagtttgagaaggtttattatccatatctattgatt
agcaagaagagatatgctggtttgttctggacaaatcccaaaaagttcgacaaaatggat
actaaaggcattgaaacagttcgaagggacaattgtttattggttaaaaaccttgtaact
gagtgccttcataaaatactaatcaacagagatgttcctggtgctgttcaatatgtcaag
aataccatttcagatcttctcatgaaccgcatggatttgtcacttttggtgattactaag
ggtctgacaaagacaggagatgattatgaagtgaaaacagctcatgttgaacttgctgaa
agaatgcgtaagagagatgctgccactgctccaaatgttggggatcgtgtaccttatgtc
attataaaagctgctaaaggtgccaaggcttatgagaggtcagaggatcccatttatgtg
ctagaaaataatattccgatagacactcagtattatcttgataatcagattgcaaagcca
attttaagaatttttgagcccattttgaagaatgctaaccaagaacttctccaaggaagt
cacacaagatctatttccatcactactcctgcaaattgtggcataatgaaatttgctaag
aagaaactaacttgtattggctgcaaaacacttattagtgagggaaccctctgcccacac
tgcaaaggaagagaagctgagctgtactgcaaaactgtttctcatgtatctgaattagaa
gaactttttggaaggctgtggacgcagtgtcaagaatgtcaaggttctcttcatctggat
gtgctctgcactagccgggactgtccaatattttaccggagaaagaaagcacagaaagac
atggctgaggcaatgcagcagttggacaggtggaacttttaa
DBGET
integrated database retrieval system
