Mangifera indica (mango): 123205812
Help
Entry
123205812 CDS
T07684
Name
(RefSeq) WD-40 repeat-containing protein MSI4-like
KO
K10752
histone-binding protein RBBP4
Organism
minc
Mangifera indica (mango)
Pathway
minc03082
ATP-dependent chromatin remodeling
minc03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
123205812
03083 Polycomb repressive complex
123205812
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
minc03036
]
123205812
Chromosome and associated proteins [BR:
minc03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
123205812
Histone modification proteins
HAT complexes
HATB complex
123205812
HDAC complexes
Sin3A-HDAC complex
123205812
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
123205812
PRC2.2
123205812
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
123205812
Heterochromatin formation proteins
Other heterochromatin formation proteins
123205812
Chromatin remodeling factors
NuRD complex
123205812
NuRF complex
123205812
NuRF complex (fruit fly)
123205812
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
CAF1C_H4-bd
WD40_Prp19
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
WD40_WDHD1_1st
Beta-prop_RIG_2nd
WDR55
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_WDR35_TULP_N
ANAPC4_WD40
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
123205812
NCBI-ProteinID:
XP_044478790
LinkDB
All DBs
Position
Unknown
AA seq
468 aa
AA seq
DB search
MKERTKGMERSVDERYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLDQATYKNRQRLY
LSEQTDGSVPNTLVIANCEIVKPRVAAAEHIAQFNEEARSPFVKKYKTIIHPGEVNRIRE
LPQNSKIVATHTDSPDVLIWDVEAQPNRHAVLGATESRPDLILTGHQDNAEFALAMSPTE
PFVLSGGKDKSVVLWSIQDYVSTLAAEPASTKSPGSAGANTKSSSKGGGSTDKPTESRSI
GPRGIFLGHEDTVEDVQFCPSSAQEFCSVGDDSCLVLWDARTGSTPALKVEKAHNADIHC
VDWNLHDVNLILTGSADNTIHMFDRRNIVSGGVGTPVHVFEGHSAAVLCVQWSPDKSSVF
GSSAEDGILNIWDYEKIGKKQDSTGSRTPNSPPGLFFRHAGHRDKVVDFNWNASDPWTIV
SVSDDCESTGGGGTLQIWRMIDLIYRPEDEVLAELDTFKSHILSCEKN
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaaagaacgaaaggaatggaaagatctgtagacgaaagatacactcaatggaag
tctttagttcctgtcctctacgattggcttgccaatcacaacctcgtttggccttccctc
tcttgccgatggggtccacaacttgatcaagctacctacaagaatcgtcagcgtctttac
ctttctgaacagactgatggcagtgttccaaatacacttgtaatagcaaactgtgagatt
gttaaacctagggttgctgctgcagagcacatagcccagttcaatgaagaagcacgctct
ccctttgtgaagaagtataaaacaattattcatcctggcgaggtgaacagaatcagggaa
ctcccacaaaacagtaaaatagtagccacacacactgacagtcctgatgtactcatttgg
gatgttgaggctcaacccaaccgtcatgctgtcctgggagctacagagtctcgtcctgat
ctgatattgactgggcaccaagataatgctgaatttgctcttgctatgagtccaactgag
ccatttgtgctttctggaggtaaggacaagtcagttgttttatggagtattcaagattat
gtctcaactttggcggcggaaccagcttctacaaaatctccaggatctgctggtgccaat
actaaaagctcatctaagggtggtgggagtactgataaacctacagagagccgctctatt
ggaccgcggggtatcttcctagggcatgaggacactgttgaagatgttcagttctgccca
tcaagtgcacaggagttctgcagtgtaggtgatgattcttgccttgtactatgggatgcc
agaactggttctactccggctttgaaggttgaaaaagctcataatgctgatattcattgt
gttgactggaaccttcatgatgtaaatctcattctgacagggtctgctgataacacaatt
cacatgtttgaccgtcgaaacatcgtgtctggtggagttgggactcctgttcatgtattt
gagggtcacagtgctgctgtcctttgtgtgcagtggtcaccagacaagtcatccgtcttt
ggcagttcagcagaggatggaattttaaacatctgggattatgagaagattggtaaaaag
caagactctactggatcaagaacgccaaattctccaccaggcttattcttccgacatgct
gggcatagggacaaggttgtcgacttcaactggaatgcatctgatccatggacaatcgtc
agtgtgtctgatgattgtgagagtactggaggaggtggcacacttcagatatggcggatg
attgatctgatctaccggccggaggatgaggttttggcagagctggacacgttcaaatct
cacattctcagttgtgaaaaaaattaa
DBGET
integrated database retrieval system
