Mangifera indica (mango): 123205867
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Entry
123205867 CDS
T07684
Name
(RefSeq) protein CHROMATIN REMODELING 5-like isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
minc
Mangifera indica (mango)
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
minc03021
]
123205867
03036 Chromosome and associated proteins [BR:
minc03036
]
123205867
Transcription machinery [BR:
minc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
123205867
Chromosome and associated proteins [BR:
minc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
123205867
SLIK complex
123205867
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HTH_CHD1_Hrp3
Chromo
CHD1-like_C
HDA2-3
ResIII
DEAD
Chromo_MIT1
OAM_alpha
KH_PARP14_5
Motif
Other DBs
NCBI-GeneID:
123205867
NCBI-ProteinID:
XP_044478847
LinkDB
All DBs
Position
Unknown
AA seq
1764 aa
AA seq
DB search
MAFYRNFTNETVSQSVLEDKGQEQSVGRIHSSVGNEDVDGTYGERGFDINMDVQYQSDGE
LDDASRLQNEVAADDHGSVRDLNMQPSGRRTALGGGWGSTFWKDCQPMGPAAGGSDSGHD
SKSEYKNVEGSEDNSLDDRDDRFDSDDEGQKEVGKGPRVQSDVPADEMLSDEYYEQDGED
QSDSMHYRGFSHSVGLNSRPQSKPAAVNNNVARRSRALKSCEYDDNNDNNDDADYEDEDE
EDDPDDADFEPDHGVTSGRTGNKDRDWDVEESDEEEISDEDLDVSDDDDSYYMKKPKGRQ
RGVKANRNVKSAREHKSLHASSRQKRGKVSVEEYNYSAEDFDSESDEAFKSMTRRGVQLR
KGNAWSTMSTSFTGQNSEVRTSTRSVRKVSYVESDESEEVDESKKKKPQKDEIEEEDGDT
IEKVLWHQPKGMAEDALKNNRSTEPVLLSHLFDSEPDWNEVEFLIKWKGQSHLHCQWKSF
AELQNLSGFKKVLNYTKKVMEDIRYRKAVSREEIEVNDVSKEMDLDIIKQNSQVERIIAD
RISKDSSDNVMPEYLVKWQGLSYAEVTWEKDVDIAFAQDAIDEYKAREAAMAVQGKMVDH
QRKKSKASLRKLDEQPEWLKRGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSV
SMLGFLQNAQQIPGPFLVVVPLSTLSNWAKEFRKWLPTLNIIVYVGTRASREVCQQYEFY
NDKKVGRPIKFNALLTTYEVILKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFST
KNKLLITGTPLQNSVEELWALLHFLDPDKFKSKDDFVQNYKNLSSFNENELANLHMELRP
HILRRVIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIV
VELKKCCNHPFLFESADHGYGGDMGINDNSKLERIILSSGKLVILDKLLTRLHETKHRVL
IFSQMVRMLDILAEYMSYRGFQFQRLDGSTKADFRQQAMDHFNAPGSEDFCFLLSTRAGG
LGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKK
KMVLDHLVIQKLNAEGRLEKKEAKKGSYFDKNELSAILRFGAEELFKEDRNDEESKKRLL
SMDIDEILERAEKVEEKEAEGEQGNELLSAFKVANFGNAEDDATFWSRWIKPDDVAQAEE
ALAPRAARNTKSYAEANEPERGSKRKKKGSEAQDPPERVQKHRKAEFSVPTLPIMEGASA
QVREWSYGNLSKRDAQRFSRAVMKFGNPSQIGQIAVEVGGAVASVPPEAQIELFDILIEG
CTDAVKEGSLDPKGPLLDFFGVSVKANDLLTRVQELQLLEKRIIRYEDPIKQFRVLMYLK
PTNWSKGCGWNQIDDARLLLGIYYHGFGNWEKIRLDDRLGLTKKIAPVELQHHETFLPRA
PNLKERANTLLEMELAAVGGKSANAKGGRKASKKEKGNILNMSISQIKGKKGKSGTSKFN
FQITKDRHKPQRVEPLVKEEGEMSDNEEVYEQFKEVKWMEWCEDVMITEIKTLQRLHRLQ
TTSADLPKEKVLSRIRNYLQLIGRRIDQIVLEHEEELYKQDRMTMRLWNYVSTFSNLSGE
RLHQIYSKLKQEQDEEAGVGPSHINGSASGPIDSSYLNNFSTFTRPKGYKNVTTYQTAEP
IHKGIDTKKFEAWKRRRRAEAEAFPPAQAILQRPISNGARVSDPSSLGILGAAPTDSRRF
GNERPYRIRQAGFPRRPAFPSGIK
NT seq
5295 nt
NT seq
+upstream
nt +downstream
nt
atggctttttatagaaatttcactaacgaaacagtttcacaaagcgtacttgaagacaaa
ggccaagaacaaagtgttggtagaattcacagctcagtaggtaatgaggatgtagatggg
acttacggtgaaagaggttttgatattaatatggatgtacagtatcaaagcgatggagaa
ttagatgatgctagtaggttgcagaatgaggtagctgctgatgatcatggcagtgtgaga
gatttaaatatgcagccttctggaaggagaacagctttgggtgggggatggggttcaact
ttttggaaggactgccaacctatgggccctgctgctggggggtctgattctgggcatgat
tcaaaatctgaatataaaaatgttgaagggtctgaagacaattcactggatgacagggat
gatagatttgattctgatgatgaggggcaaaaagaagttggcaaggggccaagagttcag
tctgatgtaccagcagatgagatgttatctgatgagtactatgagcaggatggggaagat
caaagtgactccatgcattatagaggcttcagccattctgttggcttgaattctaggccc
cagtctaagcctgcagctgttaataacaatgttgcaagaagatcaagagctttaaaaagc
tgtgaatatgatgacaacaatgacaataatgatgatgctgattatgaagatgaggatgaa
gaagatgaccctgatgatgcagattttgagcctgatcatggtgttacaagtggtcgcact
ggcaacaaggatagagactgggatgttgaagaatctgatgaagaagaaattagtgatgag
gatctagatgtctctgatgatgatgattcttattatatgaagaaaccaaagggtagacaa
cgtggtgtgaaagccaatcgtaatgtaaaatctgctagagaacataaatcattgcatgcg
tctagtcgacaaaaaagagggaaagtatcagtggaagagtacaattactctgctgaggac
tttgacagtgagagtgatgaggctttcaagagcatgaccaggagaggtgtgcaacttcgt
aaaggcaatgcttggtctacaatgtcgacgagttttactggacaaaacagtgaggttcgt
acttcaacgaggtcagttcggaaggtatcatatgttgagagtgatgaaagtgaagaagtt
gatgaaagcaagaagaaaaagccccaaaaggatgagatagaggaggaagatggtgatacc
attgaaaaggtgctatggcaccagccaaagggcatggcggaagatgctttaaagaacaat
agatcaacagagcctgtgctgttaagtcacttgtttgattctgagcctgattggaatgag
gtggaattcctaataaaatggaaaggccagtcacatttgcattgtcagtggaaatcattt
gctgagcttcaaaatcttagtggttttaaaaaggttttgaattatacaaaaaaagtaatg
gaggatataagataccggaaggctgtttcacgtgaagagattgaggtcaatgatgtgagt
aaggaaatggacttggatatcatcaagcaaaatagtcaggttgagagaataattgctgat
cgaataagtaaagatagctctgataatgtgatgccagagtatttagtcaagtggcaaggc
ctttcatatgcagaagtgacctgggagaaggatgtagatattgcttttgctcaagatgct
attgatgagtacaaggctcgagaggctgcaatggctgtacaagggaaaatggttgatcac
cagcgtaagaagagcaaagcaagtttaagaaagcttgatgaacaacctgaatggttaaaa
cgtggaaagcttcgtgattatcagcttgaaggtttgaattttctggttaatagttggaga
aatgataccaatgtcattttggctgatgaaatgggtctcggtaaaactgttcagtcagtg
tcaatgcttggtttcttacagaatgcccaacaaatacctggtccatttctcgtggttgta
ccattatccaccttgtctaattgggcgaaagaatttagaaagtggcttcctaccttgaat
attattgtatatgttggtacccgtgcaagccgagaggtttgccagcaatatgagttttat
aatgataagaaagttggtaggcctataaaatttaatgccttgttgaccacatatgaagtg
atcctaaaggacaaagctgttttgtccaagataaaatggaattatttgatggttgatgag
gcgcataggttaaagaatagtgaggcgcagttgtatacaacactttcggaatttagcacc
aaaaacaagttgcttattactggcactccattgcaaaatagtgtggaagagctatgggct
ttgcttcactttcttgatcctgataagttcaagagtaaggatgatttcgtccaaaattac
aagaatcttagttcattcaatgaaaatgagcttgctaatcttcatatggaactgaggcct
cacattctccggagagtcattaaggatgttgagaagtccttgcctccaaagattgaacgt
attcttagagttgaaatgtctcctcttcagaagcagtactataagtggattctagagcgc
aacttccatgatttgaacaagggagttcgtgggaatcaagtttcacttttgaatattgtt
gtcgagttgaaaaaatgttgcaatcatcccttcctatttgagagtgcagaccatggttat
ggtggggacatgggcattaatgataacagtaaattggagagaattattctgagcagtggg
aagcttgttatacttgataagcttctaaccaggttgcatgagacaaaacatcgtgtgttg
atcttttcccagatggttagaatgttggatatactagcagagtacatgtcttatagaggt
ttccagtttcaaaggcttgatggtagtacaaaggctgattttcgccagcaagctatggat
cattttaatgcacctggtagtgaggatttttgcttcttgctttcaactcgtgctggtggc
cttggtatcaatcttgcaacagcagacacagttataatatttgattctgactggaatcca
cagaatgacttacaggcaatgagtagagctcatagaattgggcagcaagaagttgtcaac
atctatagatttgttacaagcaaaagtgttgaggaagacatcctggagcgtgctaagaaa
aagatggttcttgaccatttggtgatccaaaagttaaatgccgagggtaggctggagaag
aaagaagcaaagaaagggagttattttgacaaaaatgaactctctgctattttgagattt
ggggctgaggaactttttaaagaagacagaaatgatgaagaaagtaaaaaaagactttta
agtatggatattgatgaaatacttgaaagagcagagaaagttgaggagaaggaagctgaa
ggagagcaagggaatgaactgctcagtgcttttaaggttgccaatttcggtaatgctgaa
gatgatgcaactttctggagtcgttggataaaacctgatgatgtagctcaagctgaagaa
gctttagctcctcgtgctgctaggaatactaagagctatgcagaggcaaatgaacctgag
agaggtagtaaaaggaagaagaaagggtctgaggctcaggatcccccagagagagtccag
aagcaccgcaaagcagaattttctgttcccacactcccaattatggagggagcatctgca
caagtgagagaatggtcttatgggaatctttctaagagagatgcacagcgtttttctcgt
gcggttatgaagtttgggaaccccagtcaaatcggtcaaatagctgtggaggttggtggt
gctgttgcatcagttccacctgaagcacagattgagctttttgatattttaattgagggg
tgtacagatgcagtcaaagaaggaagtctggacccaaagggtcctttgctggattttttt
ggtgtctctgtgaaggctaatgatctactaacccgtgtccaagaacttcaactcttggag
aagcgcataattcgctatgaagatcctattaagcaatttcgagtgctgatgtatcttaaa
cctacaaattggtccaaaggttgtgggtggaatcaaattgatgatgcaagattgcttctg
ggtatatattaccatggatttggcaattgggaaaaaataaggttagatgataggcttggc
cttactaagaagattgctcctgttgaacttcaacaccatgagacttttctaccacgtgca
ccaaatctgaaagagcgtgctaacacacttttggaaatggaacttgcagctgttggtgga
aaaagtgccaatgctaaaggtggtcgcaaggcttccaaaaaggagaaaggaaatattctt
aacatgtcaatatctcagatcaagggcaagaaaggaaagtctggtacctccaagttcaat
ttccaaattaccaaagatagacataaacctcaaagagtcgaacctttagtaaaagaagag
ggtgaaatgtctgacaatgaggaagtatatgagcagtttaaggaagtgaaatggatggaa
tggtgtgaagatgtcatgattactgaaatcaaaaccctgcagcgtcttcacaggttgcag
accaccagtgctgatcttccaaaagaaaaggtgctttcaagaattaggaactacttgcag
cttataggacgaaggatagaccaaattgttttagagcatgaagaggaactgtataaacaa
gataggatgaccatgcgattgtggaactatgtctccaccttctcaaatctttctggggag
aggcttcatcagatttattcaaaactaaagcaggagcaggacgaggaggcaggggttgga
ccctcccacattaatggctctgcttctggtcctattgacagtagttatctaaataatttt
tctaccttcactaggccaaaggggtacaagaatgtgaccacctatcaaacggcagaacca
attcacaagggtattgacacaaaaaaatttgaagcatggaagagaaggagaagagcggaa
gctgaagcctttcccccagctcaggccatattgcaaagacctattagtaacggtgctcgt
gtatcagatccaagctcactgggaattcttggggcggcacctactgacagcagacgattt
ggtaatgagagaccttatcggatacgtcaagctggctttccacgcagacccgctttccct
tcaggaatcaagtag
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integrated database retrieval system
