Mangifera indica (mango): 123205880
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Entry
123205880 CDS
T07684
Name
(RefSeq) protein SMG7-like
KO
K14409
protein SMG7
Organism
minc
Mangifera indica (mango)
Pathway
minc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123205880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
minc03019
]
123205880
Messenger RNA biogenesis [BR:
minc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
123205880
mRNA cycle factors
Common to processing body (P body) and stress granule
123205880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
Motif
Other DBs
NCBI-GeneID:
123205880
NCBI-ProteinID:
XP_044478870
LinkDB
All DBs
Position
Unknown
AA seq
981 aa
AA seq
DB search
MMIVQMDKMSAPSSRELVQRLYEKNIELENKRRKSAQARVPSDPNAWQQMRENYETIILE
DYAFSEQHNIEFALWQLHYKRIEELRAHYSAAISATSSNTSLGVKVPARPDRVPKIRLQF
KTFLAEATGFYHELILKIRAKYGLPLGYFSEDSENRITMDKDGKKHAELKKGLVSCHRCL
IYLGDLARYKGLYGEGDSKSREYAAALSYYLQSASLVPSSGNPHHQLAILASYSGDELTV
VYRYFRSLAVDTPCTTARDNLIVLFEKNRQIYSQMFRDVKLSTAKEHRRKGRGKSEAKLA
SKDTDVEPISVTESVPSIQEKLKSFCTRFVRVNGILFTRTSLETFADVLAFVSSGLCDLL
SSGPEEELSFGSDAAENALFIVRLISILVFTVHNLKKESENQTYAEIVQRAALLQNAFTA
VYELMGHVMKRCTQLRDPSSSILLPGVLVFVEWLACCPEIALGSDDDEKQATVRTHFWNQ
CISFLNKMLSLGPMSMDDDEDMTCFFNMSRYDEGETENRLALWEDFELRGFLPLLPAQTI
LDFSRKRSFGGDGNKERKARMKRILAAGKALATVVTIDQKTVFFDSRAKKFVIGVEPLDD
VTFSSYTNMSKSNDIIGENQTEKKMNLGVVHVNPQLYVDGEEDEVIVFKPVVTEKRADLI
GSNQMTFDGSKPGHSASAGDLQLYSGPVSAPIANLCQPAITLDNSSQDPVSVASILPQQC
QPFQLHTSNRLMEEEASLANSFKGLRVTENGHVLKHDLQENMGVSLPAVGLVPIQQSVNA
STSSLFYSHLKGPEAMIPPKIDAVASSGVAFDSLAVKASSALPAGQRKNPVSRPVRYLGP
PPGFSPVPTKQVTLPTLGSDLTSENPLMDDYSWLDGYQLPSSTGGLSSINYPLHANPQYI
GNSNGMTGTVSFPFPGKQSPAMQFQVEKQKGWQDFQTLEHLKLQNDQQLQQQQQQLVNGN
QRFALPEQYHGQSIWASRYFV
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atgatgatagtgcagatggataaaatgtctgctccttcgtcaagggagcttgtgcagcgt
ctttatgaaaagaacattgagttggaaaataagcggcgaaagtcagcccaggcacgtgtt
ccttcagatcccaatgcctggcaacagatgcgtgagaattatgaaacaataattcttgag
gactatgctttttctgagcagcacaatatcgaatttgcattatggcagttacattacaaa
cggattgaggaactgagagcacattatagtgctgctatatctgccactagctcaaacaca
tctctgggtgtgaaagtacctgcacgacctgatcgagttccaaagattagactgcagttc
aaaacctttcttgcggaggcaactggtttttatcatgaacttatattgaagataagagca
aagtatgggcttcctttggggtatttttccgaggattctgagaatcgaattaccatggac
aaagatgggaagaaacatgctgagttgaagaaaggtttggtatcttgtcatcgctgtctg
atatacttgggtgaccttgcaaggtacaaaggattatatggggagggtgattccaaatct
cgcgaatatgcagcagctttgagttactatttgcaatctgcatctctggtaccctcaagt
gggaacccccatcatcagcttgctatattggcctcttattcaggtgatgaattgactgtt
gtctatcgttattttcggagtttggctgttgatacaccctgtacaactgcaagggataac
ttgattgtattatttgagaagaaccgtcagatttactctcagatgttcagggacgttaag
ttgtctactgccaaggaacatcgacgcaaaggaagaggaaaaagtgaagcaaaacttgca
tctaaagatactgatgtggagcccatttctgtgacggaaagtgtgcctagcatacaggag
aagcttaaatcattttgcacccgctttgtgcgtgtaaatggcattcttttcactcgtaca
agtcttgagacatttgcagatgttcttgcttttgttagtagtggattatgtgatcttctt
tcatctggaccagaggaggagctgagctttggatcagatgcagctgagaatgctcttttt
attgttaggcttatctccatccttgtattcacagttcataatttgaagaaggaaagtgaa
aatcagacttatgcagaaatcgtacagcgtgccgcacttcttcagaatgctttcactgca
gtgtatgagttaatggggcatgtaatgaagagatgtactcagctgagggatccatcttca
agtattctgttacctggtgttctggtctttgttgagtggttggcttgctgtccagagatt
gctttaggcagtgatgatgatgagaagcaggcaactgtccgaacacatttttggaatcag
tgcatatccttcctgaataagatgctgtcacttgggccaatgtccatggatgatgatgaa
gacatgacttgttttttcaacatgagcaggtatgatgaaggggaaactgaaaaccgactg
gcattgtgggaggactttgagttgagaggattcttacctcttcttcctgcacagactatc
ttggatttttcacggaaacgctcctttggaggtgatggcaataaggaaaggaaagctcgt
atgaaaaggattctagctgctgggaaggctttggcaaccgtagttaccattgaccaaaag
acagtattttttgattcaagggcgaagaaatttgttattggtgttgagcctttggatgat
gtaacgttcagctcctacacaaacatgtccaaatcaaatgatataataggagaaaatcaa
actgagaaaaagatgaatttgggtgttgtgcatgtgaacccacagctttacgtggatggg
gaggaggatgaagtgattgtttttaagccagtagtgacagagaagagagctgatctgatt
ggctcaaaccagatgacctttgatggctcgaagcctggtcatagtgcatccgctggtgac
ctgcaattgtacagtggtcctgtttcggctcctatagctaacctttgtcagccagctatt
actcttgataatagttcacaagatcctgtatctgttgctagtatcctacctcagcagtgc
cagccatttcaattgcatacttcaaaccgtttaatggaagaagaggcttctcttgctaat
agctttaaaggtttgagggtcacagaaaatgggcatgtcttgaaacatgatttgcaggaa
aatatgggtgtttcgcttccagcggtagggctggttccaattcaacaatctgttaatgct
agtactagtagtttgttctacagtcatttgaaagggccagaagctatgattccacccaag
attgatgcagttgcatcttctggagtggcttttgacagtttggctgtaaaagcttcatca
gctttgccagcaggccagaggaaaaatccagttagccgcccagttcggtatcttggacct
ccacctggcttcagtcctgttccaaccaaacaagtgactctaccaactctaggttcagac
ttgaccagtgagaatcctctaatggatgattacagctggttggatggatatcagttgcca
tcttcaacaggaggccttagttccatcaattatccattgcatgcaaaccctcagtatatt
ggtaacagtaatggtatgactgggacagtcagctttccttttcctggaaaacaatctcca
gcaatgcagttccaggttgaaaagcagaagggttggcaggatttccagactcttgagcat
ctaaaattacagaatgatcagcagctgcagcaacagcagcaacaactcgttaatggaaac
cagcggtttgctctgcctgagcaatatcatggacagtctatctgggccagtcgttatttt
gtgtga
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