Mangifera indica (mango): 123206062
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Entry
123206062 CDS
T07684
Name
(RefSeq) pinin-like isoform X1
KO
K13114
pinin
Organism
minc
Mangifera indica (mango)
Pathway
minc03013
Nucleocytoplasmic transport
minc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123206062
03015 mRNA surveillance pathway
123206062
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
minc03019
]
123206062
03041 Spliceosome [BR:
minc03041
]
123206062
Messenger RNA biogenesis [BR:
minc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
123206062
Spliceosome [BR:
minc03041
]
Complex C
Other components
EJC/TREX
123206062
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
123206062
NCBI-ProteinID:
XP_044479092
LinkDB
All DBs
Position
Unknown
AA seq
424 aa
AA seq
DB search
MGSTAVENQKTAEELQREIDELHRQQREITERLRDPRGLRRGALSGAGPRNFAANGSRQR
GFSRPFQADRTDVEDQPPAKRRLLSAVVKLDDGEITEHAEAMKEAGQEGTVAANQSDRKP
TDLQHGGWSRRDGHQKVAKMDDSMPVMEHVPRVLPKDEDPSLVNRNKRMLGQLLGTLEKF
RKEDMQLSGSEAYRQRSNALQRAEQRAREESERLRLQEREQIAEKRRRDLTLRARVAAKA
EEKKLELLFLQWSEHRKKLSNFIRTKSEPPIYYLPAKPLDEDAISLEQHREQEFSEWKAA
RREELSKYQKQISEQYVANVEKELERWQNARKARKANNDMLNLQETMDKELDSHRLEHGP
KSRKIPGGSNNDEDEEDVEDINVGEDDMMDDVLDVEDNRRTDESSKADAGIITSPHPENI
ESGN
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgggaagcacggcagtagagaatcagaaaactgccgaagagctccagcgagagatcgac
gagctccatcgccagcagcgagagattacggaaaggcttcgggacccgcgaggactccgt
agaggagccttgtctggtgctggccctcgaaatttcgccgccaatggatcacgccagcgt
ggcttttctcgaccttttcaggctgataggactgacgttgaagatcaacctccagctaaa
agaagactcttgtcagccgttgttaagttggatgatggagagatcactgagcatgctgag
gcaatgaaggaggcaggtcaagaaggaactgtggcagctaatcagagtgataggaagcct
actgatttgcagcatgggggctggtccagaagggatggacatcagaaagttgcaaagatg
gatgattcaatgccagtaatggagcatgttcctcgagttttgccaaaagatgaggatcca
agtttggttaatagaaataagagaatgctgggacaacttttggggactttggagaaattc
aggaaagaagatatgcagctttcgggatcggaggcatacaggcagaggtcaaatgctttg
caaagagctgagcaaagagcacgtgaagaaagtgagaggctgagacttcaagagcgtgag
caaattgcagaaaagaggaggagagatctgactcttagggctcgtgttgcagcaaaggca
gaagagaagaagttggaattgctatttctacagtggagtgagcaccgtaaaaagcttagc
aatttcataaggaccaaatcggagcctccaatttattatttacctgccaaaccgctggat
gaagatgcaatctcactagagcagcatagggaacaggaattttcagaatggaaagctgct
agaagggaagaactatcgaaatatcagaagcaaatctctgaacagtatgttgcaaacgtt
gagaaggaactggagcggtggcaaaatgcaagaaaagctaggaaagcaaacaatgatatg
ttaaacttgcaggaaacaatggacaaagaattggacagtcatcggcttgagcatggtcca
aaatcaaggaagattccaggtggtagcaataatgacgaagatgaagaggacgtggaagat
atcaatgttggggaggatgatatgatggacgatgtgctggatgttgaggataacaggaga
acagatgaatcttccaaggcagatgctggtattattaccagcccacatcctgaaaatata
gaaagtggtaactga
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