Mangifera indica (mango): 123206299
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Entry
123206299 CDS
T07684
Name
(RefSeq) DNA damage-binding protein 1-like
KO
K10610
DNA damage-binding protein 1
Organism
minc
Mangifera indica (mango)
Pathway
minc03420
Nucleotide excision repair
minc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
123206299
09124 Replication and repair
03420 Nucleotide excision repair
123206299
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
minc04121
]
123206299
03400 DNA repair and recombination proteins [BR:
minc03400
]
123206299
Ubiquitin system [BR:
minc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
123206299
DNA repair and recombination proteins [BR:
minc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
123206299
TCR (transcription coupled repair) factors
Cul4-CSA complex
123206299
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
DUF6638
PP2C_2
Motif
Other DBs
NCBI-GeneID:
123206299
NCBI-ProteinID:
XP_044479397
LinkDB
All DBs
Position
Unknown
AA seq
655 aa
AA seq
DB search
MANLVQQDYVNSLLEELQVLDIKFLYGCSKPTIVVLYQDNKDARHVKTYEVALKDKDFAE
GPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYCSANTFKAIPIRPSITKAYGRVDAD
GSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAFVYIGSSYGDSQ
LIKLNVQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRN
GIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGF
CSQAQTLFCHDAVFNQLVQVTSSSVRLVSSTSRELRNEWKAPAGYSVNVATANATQVLLA
TGGGHLVYLEIGDGTLTEVKHAQLEYEISCLDINPIGENPNYSQIAAVGMWTDITVRIFS
LPDLNLITKEHLGGEIIPRSVLLCAFEGVCYFHSVASFDGSSFDKIEERARDYNANWMSA
VEILDDDIYLGAESNFNLVTVRKNSEGATDEERGRLEHQGKCHRQEGEFVNRFRHGSLVM
RLPDSDVGQIPTVIFGTVNGVIGVIASLPQEQYVFLEKLQSNIRKVIKGVGGLNHEQWRS
FNNEKKTVDAKNFLDGDLIESFLDLSRSRMDEISKTMNVSVEELCKRVEELTRLH
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atggctaatctggttcagcaagattatgtgaattccttgcttgaggagcttcaggttttg
gatatcaagtttctttatgggtgttcaaaaccaacaattgtagttctctaccaggataac
aaagatgctcgtcatgtgaagacatatgaggttgctttgaaggataaagattttgctgag
ggcccttggtcccagaataatttggacaatggagctgatttattgataccagtaccccca
cctctctgtggtgtcctcataattggagaagaaacaattgtctattgtagtgctaatact
tttaaagcaattccaatcaggccatctatcacgaaggcctatggaagagttgatgctgat
ggttctaggtatttacttggtgaccatgctgggcttctccacctgctggttataacccat
gagaaagagaaggttactggactaaaaattgagcttttgggggaaacatctatcgcatct
actatatcatatttggataatgcatttgtgtatattggctcaagctatggagattcacag
cttataaagctaaatgtacaacctgatgcaaaaggttcatatgttgaagtattagaaagg
tatgtcaacttggggcccattgttgacttctgtgtggttgaccttgagaggcaaggccaa
ggtcaggttgtaacttgttctggagcttacaaggatggttctcttcgcatagttcgaaat
ggaattggaataaacgaacaggcatcagtggaattgcaaggtattaaagggatgtggtca
ttgagatcatctactgatgatccatttgatacctttctggtggtcagttttatcagtgaa
acacgaattttggcaatgaatcttgaggatgagctggaagaaactgagatagagggtttt
tgttctcaagcacagactttgttttgccatgatgccgttttcaatcaacttgttcaggtt
acttctagctctgtaagacttgtaagttcaacatctagggagctgcgtaatgaatggaaa
gctccagctggatattcagttaatgttgcaactgccaatgctactcaggttttactggca
actggaggtggacatttggtttatttagaaattggtgatggaacattgacagaagtaaaa
catgcacaattggagtatgagatatcatgccttgacattaatccaatcggtgaaaacccc
aactatagtcagatagctgcagttggaatgtggacagatataactgttaggatattttca
cttcctgacctaaatctgatcacaaaggagcatttgggaggagaaatcatacctcgatct
gttcttttatgtgcctttgaaggggtatgctactttcattcagttgcaagctttgatgga
tcaagctttgataaaatcgaagaacgtgcccgtgactacaatgcaaattggatgtcagct
gttgaaattcttgacgatgatatttaccttggtgctgaaagcaactttaatctggtgaca
gttaggaagaatagtgaaggtgccactgatgaggaaagagggcggcttgagcaccaaggt
aaatgtcatcgtcaagaaggagaatttgtgaatcgattccggcatggttcccttgtaatg
cggttgccagattctgatgtgggtcagattccaacagtgatatttgggacggtgaatggt
gtaattggggttattgcttcgctccctcaggagcagtacgttttcttagagaaattgcag
tcaaacataaggaaggtgataaagggtgttggagggttaaatcatgagcaatggagatca
tttaacaatgagaagaaaacagtggatgccaaaaatttcctggatggtgatttaatagag
tcgttccttgacctaagccgtagtcggatggatgaaatatccaagacaatgaatgtttcg
gtagaggagctttgtaagagggttgaggaactgacgaggttgcattga
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