Mangifera indica (mango): 123206300
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Entry
123206300 CDS
T07684
Name
(RefSeq) DNA damage-binding protein 1a-like isoform X1
KO
K10610
DNA damage-binding protein 1
Organism
minc
Mangifera indica (mango)
Pathway
minc03420
Nucleotide excision repair
minc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
123206300
09124 Replication and repair
03420 Nucleotide excision repair
123206300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
minc04121
]
123206300
03400 DNA repair and recombination proteins [BR:
minc03400
]
123206300
Ubiquitin system [BR:
minc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
123206300
DNA repair and recombination proteins [BR:
minc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
123206300
TCR (transcription coupled repair) factors
Cul4-CSA complex
123206300
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF_A
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
Motif
Other DBs
NCBI-GeneID:
123206300
NCBI-ProteinID:
XP_044479398
LinkDB
All DBs
Position
Unknown
AA seq
1104 aa
AA seq
DB search
MSIWNYVLTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEVHLLTPQGLQPMLDVPIYG
RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQI
GIIDPDCRLIGLHLYDGLFKVIPFDSKGQLKEAFNIRLEELQVLDIKFLYGCSKPTIVVL
YQDNKDARHVKTYEVALKDKDFAEGPWYQNNLDNGADLLIPVPPPLCGVLIIGEETIVYC
SANTFKAIPIRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGET
SIASTISYLDNAFVYIGSSYGDSQDKYTTLNTDTLLVVIQLIKLNVQPDAKGSYVEVLER
YVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWS
LRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQAQTLFCHDAVFNQLVQV
TSSSVRLVSSTSRELRNEWKAPAGYSVNVATANATQVLLATGGGHLVYLEIGDGTLTEVK
HAQLEYEISCLDINPISENPNYSQIAAVGMWTDITVRIFSLPDLNLITKEHLGGEIIPRS
VLLCAFEGISYLLCALGDGHLLNFLLNMSTGELADRKKVSLGTQPITLRTFSSKSTTHVF
ATSDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKL
HIRSIPLGEHARRICHQEQSRTFCICSLKNQSSAEESEMHFIRLLDDQTFEFISTYALDT
FEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILIFIVEDGKLQLIAEKETKGA
VYSLNAFNGKLLAAINQKIQLYKWMLRDDGSWELQSECGHHGHILALYVQTRGDFIVVGD
LMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLVTVRKNSEGAT
DEERGRLEVVGEYHVGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPQE
QYVFLEKLQSNIRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRSRMD
EISKTMNVSVEELCKRVEELTRLH
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atgagcatatggaactacgtcctcacggctcacaagcccactaatgttactcactcttgt
gtcggcaattttaccagccctcaggagctcaatctcattatcgcgaaatgcactcgtatt
gaagtacatttgcttactccccagggactgcagcctatgttggatgtacccatatatgga
agaattgcaactcttgaacttttccgccctcatggtgaagcacaggattttctatttatt
gcaaccgaaagatacaaattctgtgttctccaatgggatgctgagtcatctgaacttatt
acaagagcaatgggggatgtctctgatcgtataggccgtcctacagataatggtcagatt
ggcataattgatcctgattgtagattaattggactccatttgtatgatgggttgtttaag
gttattccttttgatagtaaaggacagctgaaggaagcctttaatattaggcttgaggag
cttcaggttttggatatcaagtttctttatgggtgttcaaaaccaacaattgtagttctc
taccaggataacaaagatgctcgtcatgtgaagacatatgaggttgctttgaaggataaa
gattttgctgagggcccttggtaccagaataatttggacaatggagctgatttattgata
ccagtacccccacctctctgtggtgtcctcataattggagaagaaacaattgtctattgt
agtgctaatacttttaaagcaattccaatcaggccatctatcacgaaggcctatggaaga
gttgatgctgatggttctaggtatttacttggtgaccatgctgggcttctccacctgctg
gttataacccatgagaaagagaaggttactggactaaaaattgagcttttgggggaaaca
tctatcgcatctactatatcatatttggataatgcatttgtgtatattggctcaagctat
ggagattcacaggataaatacacaacattaaatactgacactctactggttgtgatacag
cttataaagctaaatgtacaacctgatgcaaaaggttcatatgttgaagtattagaaagg
tatgtcaacttggggcccattgttgacttctgtgtggttgaccttgagaggcaaggccaa
ggtcaggttgtaacttgttctggagcttacaaggatggttctcttcgcatagttcgaaat
ggaattggaataaacgaacaggcatcagtggaactgcaaggtattaaagggatgtggtca
ttgagatcgtctactgatgatccatttgatacctttctggtggtcagttttatcagtgaa
acacgaattttggcaatgaatcttgaggatgagctggaagaaactgagatagagggtttt
tgttctcaagcacagactttgttttgccatgatgccgttttcaatcaacttgttcaggtt
acttctagctctgtaagacttgtaagttcaacatctagggagctgcgtaatgaatggaaa
gctccagctggatattcagttaatgttgcaactgccaatgctactcaggttttactggca
actggaggtggacatttggtttatttagaaattggtgatggaacattgacagaagtaaaa
catgcacaattggagtatgagatatcatgccttgacattaatccaatcagtgaaaacccc
aactatagtcagatagctgcagttggaatgtggacagatataactgttaggatattttca
cttcctgacctaaatctgatcacaaaggagcatttgggaggagaaatcatacctcgatct
gttcttttatgtgcctttgaagggatatcttacttgttatgtgcacttggagatggtcat
cttttaaattttttgttgaacatgagtacgggtgagttggcagataggaaaaaggtgtct
ctgggaacccagcctattactctccgtactttctcatccaagagtactactcatgtattc
gctacatcagataggccgactgtgatttatagcagtaacaaaaagctactttatagtaat
gtaaatttgaaagaagtcagtcatatgtgccctttcaactctgctgcttttccagacagt
cttgcaattgcaaaagaaggcgagcttactattggcacaattgatgatatccagaagctt
catatccgttctatacctcttggggagcatgcacgccgtatctgtcatcaagagcagtcc
cggactttttgtatatgtagtttgaagaaccagtctagtgcagaagaatctgaaatgcac
ttcatccgcttattagatgaccaaacatttgagttcatatcaacttacgcacttgacaca
ttcgagtatggttgctccatcctcagctgctccttctctgatgatagtaatgtctattac
tgtgttgggactgcatatgttctgccagaagaaaatgagcctaccaaggggaggatattg
attttcatagtggaagacgggaagttgcagctgattgcagagaaagaaactaagggagca
gtttattcattgaatgccttcaatggcaaattgcttgctgctatcaatcaaaaaatccag
ttatacaagtggatgctcagagatgatggtagttgggagttgcaatctgaatgcggtcat
cacgggcacatactggccctgtatgtacaaactcgtggagatttcattgttgtaggtgat
ttgatgaagtccatttcgttgttaatctacaagcatgaagaaggtgctattgaagaacgt
gcccgtgactacaatgcaaattggatgtcagctgttgaaattcttgacgatgatatttac
cttggtgctgaaaacaactttaatctggtgacagttaggaagaatagtgaaggtgccact
gatgaggaaagagggcggcttgaggtggttggtgaataccacgttggagaatttgtgaat
cgattccggcatggttcccttgtaatgcggttgccagattctgatgtgggtcagattcca
acagtgatatttgggacggtgaatggtgtaattggggttattgcttcgctccctcaggag
cagtacgttttcttagaaaaattgcagtcaaacataaggaaggtgataaagggtgttgga
gggttaaatcatgagcaatggagatcatttaacaatgagaagaaaacagtggatgccaaa
aatttcctggatggtgatttgatagagtcgttccttgacctaagccgtagtcggatggat
gaaatatccaagacaatgaatgtttcggtagaggagctttgtaagagggttgaggaactg
acgaggttgcattga
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integrated database retrieval system
