Mangifera indica (mango): 123206349
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Entry
123206349 CDS
T07684
Name
(RefSeq) nuclear poly(A) polymerase 4-like isoform X1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
minc
Mangifera indica (mango)
Pathway
minc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123206349
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
minc03019
]
123206349
Enzymes [BR:
minc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
123206349
Messenger RNA biogenesis [BR:
minc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
123206349
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Motif
Other DBs
NCBI-GeneID:
123206349
NCBI-ProteinID:
XP_044479461
LinkDB
All DBs
Position
Unknown
AA seq
715 aa
AA seq
DB search
MLSSERMSASPPSTTAPSPPHPPKQYGVTKPISMLGPTEADIQRTLELEKFLVEAGLYES
KEEAAKREEVLGRIRQIVKNWVKDLTRLRGYSDQMVADANALIFTFGSYRLGVHGPGADI
DTLCVGPSYVNREEDFFFILHNILAEMEEVTELQPVPDAHVPVMKFKFDGISIDLLYASI
SLLVVPEDLDISDISVLYDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKR
RGVYSNVTGFLGGVNWALLTARVCQLYPNAVPSMIVARFFRVYTLWRWPNPVMLCAIEEA
ELGFSVWDPRKNPRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGKKICEEIEL
NKAQWSALFEPYLFFEGYKNYLQVDIIAADVDDLRTWKGWVESRLRQLTLMIERDTYGKL
QCHPYPHEYVDSSKPCSHSAFFMGLQRKRGEMVQEGQQFDIRGTVEEFKHSINMYMFWKP
GMEICVSHVRRKQIPSYVFPEGYKRSRHPKFSSQLQSDKQCCEDSDAHQTGSGDRLFKRK
KDTDAMEQDTPGKRQSISPQKQDSASPERMAPSSLSSRTGSNSGPINPNKRMLDQEIAEV
GNLLNSSNTSVTSYDVGNESVAGSTEGNNGSIDGSVEGSNNLGSSQSDSCDADSKSLSEN
GNLDGSGVFYNGTQGELEPNTSLGEVLQSMGGMDSETVQKTSYKQAEFDDNSIRD
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgctgagttcggagagaatgagcgcgtcgccaccatcgacaacggcaccgtcaccgcct
catccacctaagcagtatggagttacgaagccaatatcgatgttgggaccgacagaggct
gatattcagagaaccctcgaattagagaagtttttggttgaagccgggctttatgagagc
aaagaggaagcagcgaagagagaagaggttctgggtcgaatcagacagattgttaaaaat
tgggtgaaggatcttactcgtttgaggggatactctgatcagatggtggcggatgcaaat
gctttaatttttactttcgggtcttatcgtcttggggtacatggtcctggtgctgacata
gacacactatgtgttggaccatcctatgtcaatcgagaggaagatttcttctttatatta
cataacatcctggcagaaatggaagaagttacagaactgcagcctgttccagatgctcat
gtcccagtgatgaaatttaagtttgatggaatatcaattgaccttctatacgcaagtatc
tctctcttggttgtaccagaagatttggacatctctgacatatctgtattgtatgatgtt
gatgaaccaactgttcggagtctcaatggatgtcgtgttgcagatcaaattcttaagctt
gttccaaatgttgagcatttttgcacaacgctcagatgtttaaagttctgggctaaaagg
cgtggtgtttactctaatgtgactggatttcttggtggtgtgaactgggcacttctcaca
gctcgtgtatgccagctttaccctaatgctgttcctagcatgattgttgctcggtttttt
cgggtttacacactatggcgctggcctaacccagtcatgctatgtgcaatcgaggaggct
gagcttgggttttctgtttgggaccctcgtaaaaatcctcgtgacaaaacccatcatatg
ccgatcataacacctgcttacccatgcatgaattctagctataatgtgtcaacaagcact
ctccgtgttatgatggatcagtttcaatacggtaaaaagatttgtgaggaaatagagttg
aataaagctcaatggagtgctctgtttgaaccatatttgttttttgaaggctacaagaac
tatctccaagttgacataattgcagctgatgttgatgatttgcgaacttggaaaggttgg
gtggaatctcgactaaggcagctgactctgatgattgagcgtgacacatatggcaaattg
caatgccatccttatcctcatgagtatgtagattcatccaagccatgctcccattctgca
ttctttatgggcttacaaagaaaacgaggagaaatggtccaggaggggcagcagtttgat
attcgtggtacagttgaagaatttaagcattcaataaatatgtatatgttttggaagcca
gggatggaaatatgtgtttctcatgttcgtcgtaagcagattccttcttatgtttttcca
gaaggttataaacgatctcgacacccaaaattttcatctcagctgcagtctgataagcaa
tgctgtgaagacagtgatgcacatcagactggatctggtgatagattatttaaaaggaaa
aaagatacagatgctatggagcaagatactccaggaaaacgacagtccattagccctcag
aagcaggattctgcatctccagagcgtatggcaccaagtagcttgagttctaggactgga
tcaaattcaggcccgattaacccaaataaaaggatgctggatcaggagattgctgaggtt
ggaaatctcttaaactccagcaatacatctgtgacaagttatgatgttggaaatgagtca
gtagcaggtagcactgagggaaataatggaagcattgatgggagtgttgaagggagcaat
aacctaggatcttctcaaagcgattcttgtgatgcagattctaaatccctctcggagaat
gggaatcttgatggcagtggagtattttacaatggaacgcagggagagttagagccaaat
actagcctcggagaagttttgcaatctatgggcggaatggactcagaaactgtgcagaaa
accagttataagcaggctgagtttgacgacaacagtataagagattag
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