Mangifera indica (mango): 123206373
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Entry
123206373 CDS
T07684
Name
(RefSeq) protein PAF1 homolog
KO
K15174
RNA polymerase II-associated factor 1
Organism
minc
Mangifera indica (mango)
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
minc03021
]
123206373
Transcription machinery [BR:
minc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
123206373
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Paf1
Motif
Other DBs
NCBI-GeneID:
123206373
NCBI-ProteinID:
XP_044479496
LinkDB
All DBs
Position
Unknown
AA seq
695 aa
AA seq
DB search
MASYRPFAPPPQSSFPPPPPPTNQNPTQPPPPPPPASTQPPQRPNQFNQNWGYNAQMPPQ
QQQNYPPAGPPPPPRQQYPYAQPPPPPPPESSYPPPPPPPPPQQQPQQPPMYYPASQYTQ
NSMYNLQPPLQPLQPPLPPPPPSSPPPSSSIPPPPPPSSPPPPPPPKEIDSGGSRFNDHD
RRMSKDVSRLDSRDHGHPRQHKPPVPPQMVKKVSGGTGRVETEEERRLRKKKEFEKQRQE
EKQRQQMKESQNAAMQKTHMMASAKGGHGSIVGSRMGDRRATPFLSGERIENRLKKPTTF
LCKLKFRNELPDPSAQPKLMTLKKDKDRFTRYTITSLEKNYKPQLYVEPDLGIPLDLLDL
NVYNPPKGVRIPLAPEDEELLRDDDVVTPVKKDGIRKKERPTDKGVSWLVKTQYISPLSM
ESTRLSLTEKQAKEMKEMKGGRNILDNLNDRDRQIKDIEASFEASKLRPIHSTNKSLRPV
QIWPLVPDFERYDDQFVVALFDGVPTADSEIYSRLDQSVRDEHESRAVMKSYVATGSDPA
NPDKFLAYMVPSVDELSKDMYDENEDVSFSWVREYHWDVRGDDADDPTSYLVSFDDDEAR
YVPLPTKLNLRKKRAREGRANEDVEHFPVPSRLTVRRRSSVAVIEPKDAGAYSNSRGTSS
KMARLDAEDSLGRSRKLSRHQDLYHSSGAEDDLSD
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcttatagaccatttgctccaccaccacaatcctcgtttcctccgccacccccg
ccgacgaaccagaaccctacccaacccccacctcctccaccgccggcatcaacacaacca
ccacagaggccaaatcagttcaatcagaactggggttataatgcccaaatgcctccccaa
caacaacaaaattatccacctgcaggaccacctccaccacctcgccaacaatacccgtat
gctcaaccaccaccaccaccgcccccggagtcgtcgtacccccctccacccccaccacca
ccaccacaacaacaaccacagcagcccccaatgtattatccagctagccagtatactcaa
aattctatgtataaccttcaaccaccattgcagccattgcaaccaccacttccacctcca
ccaccttcatctccgccacctagttcctctattccaccaccacctcctcctagttctcct
ccaccaccaccacctcctaaggagattgatagtggaggttcacgattcaatgatcacgat
agaaggatgtctaaggatgtttctaggcttgattcacgtgatcatgggcatccgaggcag
cacaagcctccagtgccaccacaaatggtcaagaaggtcagtggaggtacaggtagagtg
gagacggaggaggagaggaggttaaggaagaagaaggagtttgagaagcagaggcaagag
gagaagcaaaggcaacaaatgaaggagtctcagaatgcagcaatgcagaagactcatatg
atggcttctgctaaaggaggccatgggtcaattgtagggtccagaatgggggataggagg
gctactccatttctaagtggtgagaggattgagaataggttaaaaaagcccactacattc
ttgtgcaagttgaaattccgtaatgagcttcctgacccaagtgcacagccaaagcttatg
actttgaagaaagacaaagatcgatttacaagatacactattacttctctggagaagaat
tacaagccccagctgtatgttgagccagatcttgggatacctctggacctgcttgacctt
aatgtttacaatcctcccaagggtgtcagaatacctcttgctccagaagatgaggagttg
ttgcgggatgatgatgtggttacccctgtaaagaaagatggtataaggaaaaaagaacgg
ccaactgataaaggtgtttcttggctagttaagactcagtatatatctcctcttagcatg
gaatcaacaagactgtctttgactgaaaaacaagcaaaagaaatgaaagagatgaaggga
ggccgtaacattttagataaccttaatgatagagatagacagatcaaggacattgaggca
tcatttgaggcttcaaagctgcgccctattcattcaaccaataaaagtttacgtcctgtt
cagatttggcctctggtacctgatttcgagaggtatgatgatcaatttgttgtggcttta
tttgatggtgttccaacagcggattcagaaatctacagcaggctggaccagtctgtccgt
gatgagcatgaatcacgggctgttatgaaaagttatgtggcaacaggctccgatccagct
aacccagataaatttctggcatacatggtcccttctgtcgatgagctatcgaaggatatg
tatgatgagaatgaagatgtatcattttcttgggttcgcgagtatcattgggatgtgcgt
ggtgatgatgccgatgatccaacatcatacctcgtttcatttgatgatgacgaagctcgc
tatgtgcctctccccacaaaacttaatttgagaaagaagagggccagagaggggagagct
aatgaggatgttgaacattttcctgtgccttcaagactgactgtcaggaggcgatcaagt
gttgctgttatagagccgaaggatgctggggcttattcaaactcaaggggaaccagctca
aagatggcaaggttagatgccgaagatagcctgggaagatcacgaaagctctctcgacac
caagatctctatcattctagtggagctgaagatgacttgtctgattga
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