Mangifera indica (mango): 123207129
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Entry
123207129 CDS
T07684
Name
(RefSeq) DNA topoisomerase 2-binding protein 1-A-like isoform X1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
minc
Mangifera indica (mango)
Pathway
minc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
123207129
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
minc03032
]
123207129
03400 DNA repair and recombination proteins [BR:
minc03400
]
123207129
DNA replication proteins [BR:
minc03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
123207129
DNA repair and recombination proteins [BR:
minc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
123207129
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PTCB-BRCT
BRCT
BRCT_2
LIG3_BRCT
TopBP1_BRCT0
ECT2_BRCT0
NIBRIN_BRCT_II
Motif
Other DBs
NCBI-GeneID:
123207129
NCBI-ProteinID:
XP_044480329
LinkDB
All DBs
Position
Unknown
AA seq
1007 aa
AA seq
DB search
MLKPKPFKGASVFMSRNLVAPEIFDALLDALKLNGAEVFLCCDPSRTGPSDFHVISSSDH
EKFEDLRAKGCNLLGPQCVLSCAKENRALPKQGFTCCLAMDGVKVLASGFDMDEKVKIEK
LVTAMGGVLQTKASLDVNFVIVKNVLAAKYKWALNTLKKPIVTINWLSQCWNEHRVVPQE
SYRVLPFSGLMICVTRIPADKRKEIEKLIIQNGGNYSPELTKKCTHLICDAPEGDKYKVA
QRWGHIHIVNRKWFDQSVARRACLNEESYTVQGGSISSNKSVRSCLTVQCKEDKGIGNSL
PSLSSMASDSNVFSVPSTRFEDQDIEATLSQHTSSIFVDASVSKEVDSDAPTVQTKTESN
PNNCVADDSQSEDNDLYLSKCRISLVGFEASEMRKLVNMVRRGGGSRYVSCNSRLTHIIV
GTLSEVEKREVRSLAALGVIQVVKTSWLEDCIQERKEVPVLQKHVAYDLLLPKDSVWSTN
EAQTCMKNLNQGKKPCVFQSTPADQMLQSVNPGIGIPLLEETRAERPKINLKSESSLDVM
EGSSRQSQLPTVKNRTKSGQKMKEDPSVQNLQNRKSSMVFRGKTFCFSDSFPEDRRAEIV
QWVNQGGGEVLNDQIKHDVHFTVECHGRITVFVDASHTTFVSSHWIHSCLEDGCLLDVGS
HILYSPLSCQIPLPGFEKFRFCVSQYEDKDRMLLRNLCFVLGAKFIEKLTKKVTHLLCKF
ASGPKYEAACRWGILTVTSEWIYECVRQNGVVSLDPFCPTEVTAHDREAGLCTVSQFPTQ
AFRMVSTDEPSQLTISSQDRRALSAEASGSKNDSTICNRKASGSKNDSSIGNRNDSLQDA
SKKSNNYSKRARISEDEDQRGLLSVVHLSDPVSTKSSSLDNISKDDREVSHVPDVAAVIE
DILEQTSKIQDLNLPETTGRNKSLYSSDCSVLGQNHTDSPSVIGLSRQWLNRTVKKDDAC
NPSGDVNVGIYDGFSETQTESQVVGYEEDLSGMQMLIDKVRTRSSMT
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaaccaaagccattcaagggagcgagtgtgttcatgtcacgcaacctggtggcg
ccggagatattcgacgctcttctggacgcgctgaagctcaacggagctgaggtctttctc
tgctgcgacccctctcgtaccggccccagcgatttccatgttatctcctcttccgatcac
gagaaatttgaagatcttagagccaagggatgtaatttgttaggtcctcaatgtgtgctt
tcttgtgccaaagaaaatagagcgcttccaaaacaaggtttcacttgttgccttgcaatg
gatggtgtcaaagtacttgcctctggttttgatatggatgaaaaggttaagatagaaaag
ttggtcacagcaatggggggagtattgcagactaaagcatcattggatgttaactttgtc
attgtaaagaatgttttagctgcaaagtacaagtgggctttaaacactctaaagaaacca
attgttaccatcaattggttatctcaatgctggaacgagcaccgtgttgttcctcaggag
tcgtacagggttcttcctttttctggtttgatgatatgtgttaccagaattcctgcagat
aagcggaaggagattgaaaaacttatcatacagaacggaggcaactattctcctgagctg
acgaagaaatgcacacacttaatttgtgatgctccagaaggtgacaaatacaaagttgcc
caaagatggggccatattcatattgtaaacaggaaatggtttgatcaatctgttgctaga
agagcatgtcttaatgaggagtcctacactgttcagggtggttctatatcttccaacaaa
agtgtaaggagttgcttgacggtgcagtgtaaagaagacaagggtattggaaattcacta
ccttcactatcatccatggcttcagattcaaatgttttttctgttcccagcactcggttt
gaagatcaagatatagaagccactctctcacagcatacatcttctatttttgtggatgct
tctgtttctaaagaggttgatagcgatgccccaacagtgcagaccaaaactgaatcaaat
cccaataactgtgttgctgatgattctcagtctgaagacaatgacttatacttgtcaaaa
tgtagaatatcacttgttggttttgaagcttctgaaatgcgcaaactagttaatatggtg
cgtagaggtgggggctctcgttatgtgtcatgcaatagcagattgacacatataatagtt
ggaactctgtcagaggttgaaaaaagggaagtcagaagtcttgcagctttgggtgttatt
caagtggttaaaacctcctggcttgaagattgtatccaagaaaggaaagaagttcctgta
cttcagaagcatgttgcctatgacttgctgctacctaaagattctgtctggtccaccaac
gaagcacaaacatgcatgaaaaatttaaatcaaggtaaaaaaccctgtgtttttcaaagt
acaccagctgatcagatgctacaaagtgtgaatcctggaattgggataccgttattggag
gaaactagagctgagagaccaaaaatcaacttgaagagcgagagctctttggatgtaatg
gaaggatcatcaagacagagccaacttcccactgtaaaaaatagaactaagagtgggcag
aagatgaaagaggatccctctgttcaaaatcttcaaaataggaagtcatcaatggtattc
agagggaaaacattctgcttttcagattcctttcctgaagataggagagctgaaattgtt
caatgggtgaatcaagggggaggggaggtgctgaatgatcagataaaacatgatgtgcat
tttactgttgaatgtcatggaaggataactgtatttgtagatgcttctcacactacattt
gtatccagtcattggatccattcttgtttagaggatggatgcttgctggatgttggaagt
cacattctctattccccactttcctgtcagattcctttgcctgggtttgaaaaatttcgg
ttttgtgtttcacagtatgaggataaagatagaatgctattaagaaatttgtgctttgtt
cttggagctaagttcattgagaaattaactaaaaaggtcacccatttattatgcaagttt
gccagtggacctaagtatgaagctgcttgtagatgggggatacttacagtcacatctgag
tggatttatgaatgtgttaggcagaatggagttgtttctctggatccattttgtccaaca
gaagttactgctcatgaccgagaggcaggactatgcactgtgagccagtttcctacacaa
gcttttcgaatggtctctactgacgaaccgtctcagcttacaatttcatcccaggaccgg
agagccctgtcagcagaagctagtggtagtaaaaatgacagtactatttgtaatagaaaa
gctagtggtagtaaaaatgacagttctattggtaatagaaatgacagccttcaggatgcg
tctaaaaaatcaaataattacagtaaaagggcaagaatttcagaagatgaggaccagaga
ggtcttctttcagtagtacatctaagtgaccctgtctctactaagagttctagtctggac
aacatatcaaaagatgacagggaagtttctcatgttcctgatgtagctgctgtaattgag
gacatcttggagcagactagtaagattcaagatctaaatttaccagagacgactggacgc
aataaaagtctttattcatctgattgttcagtccttggtcaaaaccatacagattcaccc
tctgtcattgggttatctagacagtggttaaacaggactgtgaaaaaagatgatgcttgc
aacccttctggagatgtcaatgtaggcatatatgatggttttagtgaaacacaaacagag
tctcaggttgttggttatgaagaagatttatctggaatgcagatgcttatagacaaagtt
cgaacccgaagtagcatgacttaa
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