Mangifera indica (mango): 123207180
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Entry
123207180 CDS
T07684
Name
(RefSeq) replication factor C subunit 3-like isoform X1
KO
K10756
replication factor C subunit 3/5
Organism
minc
Mangifera indica (mango)
Pathway
minc03030
DNA replication
minc03410
Base excision repair
minc03420
Nucleotide excision repair
minc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
123207180
03410 Base excision repair
123207180
03420 Nucleotide excision repair
123207180
03430 Mismatch repair
123207180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
minc03032
]
123207180
03036 Chromosome and associated proteins [BR:
minc03036
]
123207180
03400 DNA repair and recombination proteins [BR:
minc03400
]
123207180
DNA replication proteins [BR:
minc03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
123207180
DNA Replication Termination Factors
ELG1-RFC complex
123207180
Chromosome and associated proteins [BR:
minc03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
123207180
DNA repair and recombination proteins [BR:
minc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
123207180
Check point factors
HRAD17(Rad24)-RFC complex
123207180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_assoc_2
AAA_22
AAA_16
AAA_11
AAA_24
AAA_5
AAA_14
AAA_30
DNAX_ATPase_lid
DUF815
AAA_7
ATPase_2
RuvB_N
ResIII
AAA_19
bpMoxR
AAA_3
nSTAND3
SLFN-g3_helicase
AAA_25
AAA_28
TniB
TIP49
AAA_2
Mg_chelatase
ABC_tran
Motif
Other DBs
NCBI-GeneID:
123207180
NCBI-ProteinID:
XP_044480404
LinkDB
All DBs
Position
Unknown
AA seq
366 aa
AA seq
DB search
MADTVSLMDVDEDANQNQNQNNTLKSNKGKDVVSAAPPDSKATPWVEKYRPQSLADVAAH
RDIVDTIDRLTTENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGI
DVVRQQIQDFASTQSFSFGAKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFTLIC
NHVNKIIPALQSRCTRFRFAPLEPSHVTERLKHVIKAEGLDVTESGLAALVRLCNGDMRK
ALNILQSTHMASQQITEEAVYLCTGNPLPIDIEQISYWLLNESFADGFKRISEMKTRKGL
ALVDIVREVTMFVFKIKMPSDVRVRLINDLADIEYRLSFGCNDKLQLGSLISTFTQARSA
LVAAAK
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaccgtttctcttatggatgtcgacgaagacgcgaaccaaaaccaaaaccaa
aacaacactctaaaatccaacaagggaaaagatgtcgtctccgccgcaccacctgacagc
aaagctactccttgggtcgagaagtaccgccctcagtcccttgctgacgtggccgctcat
cgagacattgtcgataccatcgacagattgactaccgagaaccggctgccacatctctta
ttatacggccctcctggtacgggcaaaacgtctactattctcgctgttgcacggaagctt
tacggagcgcagtaccataatatgattctggagctcaatgcatctgacgatagaggaatt
gatgttgtgaggcaacagatccaagattttgccagcacgcagagcttctcctttggagca
aaggcatcagtgaaattggtcttgcttgatgaggcagatgccatgacaaaagatgctcag
tttgccctgcgtagagtgattgagaaatacacaaagaacactaggttcacacttatttgt
aatcatgtcaacaagattattccagctctgcagtctaggtgtacgagattccggtttgct
cctcttgaaccaagtcatgtcactgagcgactcaaacatgttataaaggctgaagggctt
gatgtaactgagagtggcttagcagcacttgtacggctatgcaatggtgatatgaggaag
gccttgaacattttgcagtcaactcacatggcttctcagcaaattacagaagaagctgta
tacctatgcactggaaaccctttaccgattgacattgagcagatatcttattggcttctg
aatgaatcttttgcagatggtttcaagagaatatctgaaatgaagacaaggaaagggttg
gcattggtagatattgtaagagaagtgacaatgtttgtttttaagattaagatgccatca
gatgtccgagttcggctgattaatgatttggctgacattgagtacagactgagttttgga
tgcaatgacaagctacagcttggatctctaatttctactttcacgcaggcaaggtctgct
cttgttgctgctgcaaagtag
DBGET
integrated database retrieval system
