Mangifera indica (mango): 123208223
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Entry
123208223 CDS
T07684
Name
(RefSeq) RNA-binding protein 39-like
KO
K13091
RNA-binding protein 23/39
Organism
minc
Mangifera indica (mango)
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
minc03041
]
123208223
Spliceosome [BR:
minc03041
]
Common components
Common spliceosomal components
General mRNP proteins
123208223
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_7
RRM_8
Motif
Other DBs
NCBI-GeneID:
123208223
NCBI-ProteinID:
XP_044481543
LinkDB
All DBs
Position
Unknown
AA seq
614 aa
AA seq
DB search
MDFDEYEYLEKTVENPKPSKWKERERENGGGGARESEERERNRSSKHRSDEKDGHLDDDD
GHRLKSSKLRDETRDRDRRKERGSSRHRSRSRDGERDRYKSSWQHKDRERERDSKRDREE
KNGKDKDRDRDRERDHDKDKREREHDREREGERDKEKEREQSRGSGSRSERHQNTQDERE
RSREQELREREKERELRDRDRESRRYKEKKDDVVQPEADPERDQRTVFAYQISLKADERD
VYEFFSKAGRVRDVRLIMDRVSRRSKGVGYIEFYDVMTVPMAIALSGQLLLGQPVMVKPS
EAEKNLVQSTSNVAGASGGLTGPYSGGARKLYVGNLHYNITEDQLRQVFEPFGSVELVQL
PLDETGHCKGFGFVHFSRLEDARNALNLNEQLEIAGRVIKVSAVTDQTGMQDIGANTGDF
DDDEGGGLSLNAWSRALLMKKLDQSGSTAAITGSPGASVINSTGLTLPVAPVDGVSPVVS
SLVPAFLQGSVPTLPGQLATNLPVPTASIPIIDTISVPSECILLKNMFDPKNETYEDFDV
DIKEDVEGECSKFGKLKHIFVEKNSAGFVYLRFENTEAAMNAQRALHGRWFAGKMITATF
LVPETFETKFPDSR
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggatttcgatgagtatgaatacttggagaaaacagttgagaatcctaagccctcgaaa
tggaaggaaagggaaagggaaaatggtggtggtggagctagggaatctgaagagagagaa
aggaatcgcagttcaaagcataggagtgatgagaaggatggacatcttgatgatgatgat
ggtcatcgcttgaagagctccaaattgagagatgagacacgtgatcgtgatagaaggaaa
gaaagggggtcatcccgtcatcgctcaaggtctagagatggagagagggacagatacaag
agtagctggcaacataaggacagagagagagagagggacagtaagagggatagagaggag
aagaatggaaaggataaggacagagatagagatcgggagcgtgatcatgacaaagacaaa
agagagcgggaacatgaccgtgaaagagagggggagagggataaggagaaggagagagaa
cagtcacgtggaagtgggagtcggtcagaaaggcatcaaaacacccaggatgaaagggag
aggagtcgggagcaggagcttagggaaagagaaaaggagagggagttaagggatcgagat
agagaaagcagacgatataaagaaaagaaagatgatgtggtacagccagaggccgatcct
gaacgggatcagaggacagtatttgcataccagatttcgttgaaggctgatgaaagagat
gtttatgagtttttctcaaaagctggcagagttcgagacgtacgcctcataatggatcgt
gtttcaaggagatccaaaggggttgggtatattgaattttatgatgtaatgactgtccct
atggcaatagcactctctgggcagcttcttcttggtcaacctgtgatggttaaaccatca
gaagctgaaaagaatcttgttcagtcaacttcaaatgtggctggagcatcaggtggacta
actggtccctattcaggaggagctagaaaactgtatgttggcaatctgcattataacatt
acagaagatcaacttcgtcaagtttttgaaccatttggttctgtcgagctggtgcaatta
cctcttgacgaaactgggcattgcaaaggttttggttttgttcacttttcacgtcttgaa
gatgctagaaatgcattgaatttgaatgaacagctggagattgctggccgggtgattaag
gtgtcagctgttactgatcaaactggaatgcaagatattggggcaaatactggcgatttt
gatgatgatgaaggtggtggtttgtctctgaatgcatggtcccgagcacttcttatgaaa
aagttggatcaaagtggcagtactgcagctataactggttcaccaggcgcctctgttatc
aatagcacaggccttacactgccagtggcaccagttgatggagtttcacctgtggtgtct
tcccttgttcctgcttttttacaaggttctgttcctactcttcctggacaacttgccaca
aatctcccagtgcccactgctagcattcctattattgatacaatcagtgttccaagtgaa
tgcattctgttgaagaatatgtttgatccgaaaaatgagacatatgaagactttgatgtg
gatatcaaagaagatgttgaaggagaatgttcgaagtttggaaaattgaagcacattttt
gttgagaagaatagtgctggttttgtatacttgcgatttgaaaatactgaagctgcaatg
aatgcacaacgtgctcttcatggaagatggttcgcagggaagatgatcactgcaacattc
ttggtgccagagacattcgagactaaatttccagacagcagataa
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