Mangifera indica (mango): 123208301
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Entry
123208301 CDS
T07684
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
minc
Mangifera indica (mango)
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
minc03036
]
123208301
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
minc00535
]
123208301
Chromosome and associated proteins [BR:
minc03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
123208301
Meiosis-specific proteins
Cohesin complex and associated proteins
123208301
Proteoglycans [BR:
minc00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
123208301
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
AAA_23
DUF3496
Phage_lysis
Microp_apicomplexa_7
Motif
Other DBs
NCBI-GeneID:
123208301
NCBI-ProteinID:
XP_044481647
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Position
2:12998013..13014617
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AA seq
1201 aa
AA seq
DB search
MHIKQVIIEGFKSYREQTATDPFSPKINCVVGANGSGKTNFFHAIRFVLSDLFHNLRSED
RHALLHEGAGHQVLSAFVEIVFDNSDNRIPVDKEEVRLRRTIGLKKDEYFLDGKHITKTE
VMNLLESAGFSRSNPYYVVQQGKIASLTLMKDSERLDLLKEIGGTRVYEERRRESLKIMQ
ETGNKRQQIIQVVNYLDERLRELDEEKEELRKYQQLDKQRKSLEYSIHEKELNDARQKLV
ELEDARNKRSEISTKMYNSVLDAHEKSKDEEKRLKDIMKEVQALNKEKETVEKQQTEALK
RQTAHELDVKDLDERIYGNSQAKVDAEQQLLLLEKEIEDSLKELEKIKPEYEEQGIKEKE
ITKDIMEREKQLSILYQKQGRATQFSSKTARDKWLQKEIDDLERVLSSNLVQEQKLQDEI
HRLNVDSKERDMYIDKLKSSIETLESHNFHSHEVFNNHKAERDKLQDKRKSLWVKESELC
TEIDKLKAEVEKAEKSLDHATPGDVRRGLNSIRRIRSEYEIAGVYGPIIELLDCDEKFFT
AVEVTAGNSLFHVVVDTDETSTKIIRHLNSLRGGRVTFIPLNRVRAPHVNYPRSRDVVSL
LEKLNFSPEFRPAVAQVFARTVICRDLDVCARVARADGLDCITLEGDQVSKKGGMTGGFY
DFRRSKLKFMNIIKRNKISIDAKERELEQVRFMLQGVDQQITDLVTEQQKIDAKRVHEKS
ELEQFKQDIANANKQKKIISKALENKEKSLADVRTQIDQLRASVAMKEAEMGTELIDHLT
PEEKDLLSRLNPEITDLKEQLITCRTNRIETETRKAELETNLTTNLKRRKQELEALIASS
ENDMLPGEAELKRQELKDAKLFVQEAEQQLKGISDGLDKLTKEVKRIKNEKAKLKTLEDE
YEKKLQDDARELEQLLNKRNVLLAKQEDYSKKIRELGPLSSDAFETYVRKSIKELHKMLH
RCNEQLQQFSHVNKKALDQYVNFTEQREELQRRQAELDSGDEKIKELIAVLDQRKDESIE
RTFKGVARHFREVFAELVQGGHGHLVMMRKKDEDDDNDDDGPREVDMEGRVEKYIGVKVK
VSFTGQGETQSMKQLSGGQKTVVALTLIFAIQRCDPAPFYLFDEIDAALDPQYRTAVGNM
IRRLADMANTQFITTTFRPELVKVADKIYGVTHKNRVSRVNVVSKEDALDFIEHDQSHNA
P
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
atgcacataaaacaggttataattgaagggtttaaaagctacagagaacaaactgctact
gaccccttcagccccaaaattaattgtgtcgttggtgctaatggatctggcaagacaaac
tttttccatgctattcgttttgttttgagcgacctcttccacaacttgcgtagtgaagat
agacatgcattactccatgaaggtgcagggcaccaagttttatcggcatttgtggagatt
gtttttgataattctgacaatcgcatcccggttgataaggaggaagtgcgcttgcgtcga
acaattggtttgaagaaggatgaatatttcttggatggaaagcatatcacgaaaactgag
gttatgaatttattggagagtgctggattttctcgttctaatccatactatgttgttcag
cagggaaagatagcttctttgacactgatgaaagattctgagcggctggatttactgaag
gaaattggtggcactcgagtttatgaggagagacggcgtgaaagtttgaaaattatgcaa
gaaactggcaacaaaagacagcagataattcaagttgtcaattacttggatgagagactc
agggaactggatgaagagaaagaagagctgagaaaataccagcagcttgacaagcagagg
aaatctctagagtacagcattcatgaaaaggaacttaatgatgctcggcagaaattggtg
gagcttgaagatgctagaaacaagcgttctgaaatatcaactaagatgtataacagtgtg
ctggatgctcatgaaaagtccaaagatgaagaaaagagattgaaagatattatgaaagaa
gttcaagcattaaacaaagaaaaagaaacagttgaaaagcaacaaactgaagcactaaag
aggcagacagcgcatgagcttgatgtgaaagacctagatgaaaggatttatggaaattcg
caagcaaaagtggatgcagagcaacaacttcttttgctagaaaaagaaattgaggactca
ttgaaagagcttgagaagattaagccagagtatgaggagcaaggcataaaggagaaagag
ataacaaaagatatcatggagcgtgaaaagcaacttagcattctttatcaaaaacaaggt
cgtgccacccaattttctagtaaaacagctcgtgataaatggcttcaaaaagaaattgat
gatcttgaacgagttctttcttcaaacttggttcaagagcaaaaacttcaggatgaaatt
caccggcttaatgttgactcaaaggagcgggacatgtacattgacaagctcaaaagcagt
attgagactttagaatctcacaatttccactctcatgaagttttcaataaccataaggct
gagagggacaagctgcaggataagcggaagtccttatgggtgaaagaaagtgaactttgt
acagagattgataagctgaaagcagaagttgagaaggcagagaaaagccttgatcatgca
acccctggggatgtgaggcgagggctgaattctatccgtcggattcgcagtgagtatgaa
attgcaggagtttatggtccaattattgagctgcttgattgcgacgaaaaattttttact
gcagttgaggttactgctggaaatagcttatttcatgtggtggttgatactgatgaaaca
tcaaccaaaataattagacaccttaattcattaagaggtggacgtgttacctttattcca
ttgaatcgggtgagggctcctcatgtaaattatccaaggagtcgtgatgtggtatctctt
ctagagaaattgaatttttctcctgaattcagaccagctgttgcccaggtatttgctaga
acagtgatttgcagagatttagatgtgtgtgctagagttgctcgagctgatggtctggac
tgcataaccttggaaggtgaccaagtaagcaagaaaggtggtatgacaggaggattttat
gattttaggcgctccaaattaaagtttatgaatataatcaaacggaataaaatatctatc
gacgcaaaagaaagggaactggaacaagttagatttatgcttcaaggagtagaccagcaa
attacggaccttgttactgagcagcagaaaattgatgccaagcgggttcatgaaaaatca
gaactggagcagtttaagcaggacattgctaatgctaataagcagaaaaaaatcatttct
aaagctcttgaaaataaggaaaagtcacttgctgatgtgcggacccaaattgatcaactt
agagctagtgtggccatgaaagaggctgaaatgggcaccgagctcattgatcacttaaca
ccagaggaaaaagatcttctctcacgtttgaatcctgaaataactgatctaaaggagcaa
cttatcacctgcaggacgaatcgcattgagactgaaacaagaaaagcagagcttgagact
aatctaacaaccaacctgaagaggaggaagcaagagttggaagcccttatagcttcttca
gagaatgacatgctgcctggtgaagctgaattaaaaagacaggagttgaaggatgctaaa
ttatttgttcaggaagcagaacagcagcttaaagggatctctgatggtttagataaatta
acaaaggaagtcaagaggataaaaaatgaaaaggctaagttgaagactttggaagatgaa
tatgagaagaaacttcaggatgatgcaagagaacttgaacaactattgaataaaaggaat
gttcttctcgctaagcaggaggattactcaaagaaaattagagaattgggtccattatca
tctgatgcttttgaaacctatgtgcggaagagcatcaaagagttacataaaatgcttcat
aggtgcaatgaacaactgcagcagtttagtcatgtaaataagaaagcacttgatcagtat
gtaaatttcacagagcaaagggaggaacttcagagaaggcaagctgaactggattcaggg
gatgagaaaattaaagaacttatagcggttttagatcaaagaaaggatgaatcaattgaa
cgaactttcaaaggtgttgctcgccacttccgagaagtgtttgctgaacttgtgcaaggt
ggtcatggccatctagttatgatgagaaaaaaggatgaggatgatgacaatgatgatgat
ggacctcgtgaagtagatatggaaggaagggttgaaaaatacattggcgtgaaagtgaag
gtttcatttactgggcaaggggagacacagtcaatgaagcaattatctggaggtcaaaaa
acggttgtggccctgacgcttatttttgctatacagcgatgtgatcctgctcccttctat
ctatttgatgaaatagatgcagcactggatcctcagtacagaactgcagttggaaatatg
attcgtcgtctagcagacatggcaaatactcaatttataaccacaacatttcgaccagag
cttgtgaaagtggctgacaaaatatatggcgtgactcacaaaaacagagtgagccgagtc
aatgttgtttccaaagaagatgcgctagattttatcgagcatgatcagtctcacaatgcg
ccttag
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