KEGG   Mangifera indica (mango): 123208311
Entry
123208311         CDS       T07684                                 
Name
(RefSeq) protein SMG7 isoform X1
  KO
K14409  protein SMG7
Organism
minc  Mangifera indica (mango)
Pathway
minc03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:minc00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    123208311
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:minc03019]
    123208311
Messenger RNA biogenesis [BR:minc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Other surveillance factors
     123208311
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     123208311
SSDB
Motif
Pfam: EST1_DNA_bind EST1
Other DBs
NCBI-GeneID: 123208311
NCBI-ProteinID: XP_044481676
LinkDB
Position
2:13585969..13591807
AA seq 980 aa
MMIVQMDKVSAPSSRERVQRLYEKNIELENKRRKSAQARVPSDPNAWQQMRENYETIILE
DYAFSEQHNIEFALWQLHYKRIEELRAHYSAAISATRSNTCQGVKVPAKPDRVSKIRLQF
KTFLSEATGFYHELILKIRAKYGLPLGHISEDSENQITMDKDGKKLAEVKKGLVSCHRCL
IYLGDLARYKGLYGEGDSKSREYATASSYYLQSASLVPSSGNPHHQLAILASYSGDELVV
VYRYFRSLAVDTPCTTARDNLIVLFEKNRQIYSQMSGDVKLSTAKEHQRKGRGKGEAKLA
SRDTDIEASSVKEIVPSVQEMLKSFCTRFVRLNGILFTRTSLETFAEVLAFVSSGLCELL
SSGPGEELSFGLDAAENALFIVRFISILVFTVHNLKKETENQTYAEIVQRAVLLQNAFTA
VFELMGHVIERCIQLRDPSSSYLLPGLLVFVEWLACCPEIAAGSDGNEKLATVRTNFWNQ
CISFLNKILSLGPMSMDDDEDITCFFNMSRYDEGETENRLALWEDFELRGFSPLLPAHTI
LDFSRKHSFGGDINKERKARLKRILAAGKALTNVVTVDQKTVCFDSRVKKFLIGVEPSDD
VTFSSYPDVSNSNDIVQENQTEKEIDLAVVQPNLELYMDGEEEDEVIVFKPAVTEKRADA
IGSNWMSFDGLKPAHNASASDLQLHGGPVSAPINKLYQASTFDNSSQVPVSVASILPQQL
QPFQLHASNWLMKEEASLANSLKGLRVSENEHVVKHDLQENIGVSFPDFGLVPIQQSVNA
STSSLAYSHLKEPEAMIPPKIDAVAGVTFDSLAVKATSALPAGQRKNPVSRPVRHLGPPP
GFSPVPSKQVTAPISASYLTSENPLIDDYSWLDGYRLPPSTRGLGISTNYPSHANPQYIG
NSNGVTGTVSFPFPGKQAPAMQQLQFEKQKGWQDFQTFDHLKLQHEQQLQQQQLGNGNQQ
FAPLPEQYQGQSIWAGRYFV
NT seq 2943 nt   +upstreamnt  +downstreamnt
atgatgatagtgcagatggataaagtgtccgctccttcatcaagggagcgtgtgcagcgt
ctctatgaaaagaacattgagttggaaaataagcggcggaagtcagctcaggcacgcgtt
ccttctgatcccaatgcatggcaacaaatgcgtgagaattatgaaacaataattcttgag
gactatgccttctctgagcagcacaatatcgaatttgcattgtggcagttacattacaag
aggattgaggagctgagagcacattatagtgctgctatatctgccactagatcaaacaca
tgtcagggtgtgaaagtgcctgcaaaacctgatcgagtctccaagattagactgcagttc
aaaacctttctttctgaagcaactggattttatcatgaacttatattgaagataagagca
aagtatggtcttcctttagggcatatttctgaggattctgagaatcaaattaccatggac
aaagatgggaagaaacttgccgaggtgaagaaaggtttggtatcttgccaccgttgtctt
atatacttgggtgaccttgcaaggtacaaaggattatacggggagggtgattccaaatct
cgtgaatatgcaacagcttcgagttactatttgcaatctgcatctcttgttccctcaagt
ggcaacccccatcatcagcttgctatattggcttcttattctggtgatgagttggttgtt
gtttatcgttattttcggagtttggctgttgataccccctgtacaactgccagggataac
ttgattgtattatttgagaagaaccgtcagatatactctcagatgtctggggatgttaaa
ttgtctactgccaaggagcatcaacgcaaaggaagagggaaaggtgaagcaaaacttgct
tctagagatactgacatagaggccagctctgtgaaggaaattgtgcctagtgtacaggag
atgctcaaatcattttgcacccgctttgtgcgtttaaatggcattcttttcacacgtaca
agtctggagacatttgcagaagtccttgcttttgttagcagtggattatgtgagcttctt
tcatctggcccaggggaggagctgagttttggattagatgcagctgagaatgctcttttt
attgttaggtttatctccatccttgtattcacagtccataatttgaaaaaggaaactgaa
aatcagacttatgcagaaatcgtacagcgtgctgtgcttcttcagaatgctttcactgct
gtgtttgagttaatggggcatgtcatagagagatgtattcagctgagggatccatcttca
agttatctgttacctggtcttctggtttttgttgagtggttggcgtgctgtccagaaata
gctgctggcagtgatggtaatgagaagctggcaactgttcgaacaaatttttggaatcag
tgcatatccttcctgaataaaattctgtcactggggccaatgtccatggatgatgatgaa
gatataacttgcttttttaacatgagcaggtatgatgaaggggaaactgaaaatcgactg
gctttatgggaggattttgagttgagaggattctcacctcttcttcctgcacatactatc
ttggatttttcaaggaaacattcctttggaggtgatatcaataaggaaaggaaagcccgc
cttaaaaggattctagctgctgggaaggcattgacaaatgtagttactgttgaccaaaaa
acagtatgctttgattcaagggtgaagaaatttcttatcggtgttgagccttcggatgat
gtaacattcagctcctacccagacgtttccaactcaaatgatatagtgcaagaaaatcaa
actgagaaagagattgatttggctgttgttcaaccaaacctagagctttacatggatggg
gaagaggaggatgaagtgattgtttttaagccagcagtgacagagaagagagcagatgca
attggctcaaactggatgtcctttgatggcttgaagcctgctcataatgcatctgctagt
gatctgcaattacatggtggtcctgtttcggctcctataaataagctataccaggcatct
acttttgataatagttcccaagtacctgtatctgttgctagtattctacctcagcagctc
cagccgtttcaactgcatgcttcaaactggttaatgaaagaagaagcttctcttgctaat
agcttaaaaggtttgagggtctcagaaaatgagcatgttgtgaaacatgatttgcaggaa
aatataggcgtttcattcccagattttgggctggttccaatccagcaatctgttaatgct
agtactagtagtttggcctacagtcatttgaaagagccagaagctatgataccacccaag
attgatgctgttgctggagttacttttgacagtttagctgtaaaagctacatcagcattg
ccagcaggccagaggaaaaatccagttagccgccctgttcggcatcttggacctccacct
ggcttcagccctgttccttccaaacaagtgactgcaccaatttcggcttcatacttgact
agcgaaaatcctctgattgatgattacagctggttggatggatatcggttgccaccttca
acgagaggccttggtatttccaccaattatccatcacatgcaaatcctcaatatatcggt
aatagcaatggtgttacggggacagtcagctttccgtttcctggaaaacaagctccagca
atgcagcagctccagtttgaaaaacagaaaggctggcaggatttccaaacttttgatcat
ctaaaattgcagcatgaacagcagctgcagcaacagcaattgggtaatgggaaccagcag
tttgctcctctgcctgagcaatatcaaggacagtctatctgggccggtcgttatttcgtg
tga

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