Mangifera indica (mango): 123208330
Help
Entry
123208330 CDS
T07684
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog isoform X1
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
minc
Mangifera indica (mango)
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
minc01009
]
123208330
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
minc03021
]
123208330
Enzymes [BR:
minc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
123208330
Protein phosphatases and associated proteins [BR:
minc01009
]
HAD phosphatases
Fcp/Scp phosphatases
123208330
Transcription machinery [BR:
minc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
123208330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
TMD_POM152
Motif
Other DBs
NCBI-GeneID:
123208330
NCBI-ProteinID:
XP_044481712
LinkDB
All DBs
Position
2:complement(4353509..4362650)
Genome browser
AA seq
726 aa
AA seq
DB search
MASVGVAPTSCLRESSGHTGGVDKLPKEMNDMKIREDKEMEATVVDGNGTETGHVIVTTI
GGRNGQPKQAMAKCLNDAVHKLQLSLLEGVSTDHQLYTAGSLLSKSDYNDIVTERTIANL
CGYPLCLHPLPLSDSRKHKGRYHISLKEHKVYDLQEVYLFCSTGCLVNSKAFLASLGEER
VRVVDERRIEEVLKVVGAESGVESEVVRRFGELEIREKDRGEGEVGEVAAGPSDAVEGFV
PKAKYKPKTTKVKREKNEGEDKAKSKSSLEKNKGVNAKTNQQNSKKDTFFSDVNFMSTII
MNDEYSISKVPSGSIGMTSQLKYEESKTTKDGKNLEAPRATLGSLASKTEDSDTIMMESS
EKSQSAKDELAIQEVPSTSAPLQSDSSMITLEAESACPAEKEPVLSVGMPKSSLKSSGSK
KLCRSVTWADEKTDSSGSGNLCEVKEMGDGDGDDDALRFASAEACAMALSQAVEAVASGD
SDAADAVSEAGIIILPHPLDVVGEEQVEGVDLLEPKEASLKWSSKPGIQRSEFFDPEDSW
FDSPPEGFNLSLSSFATMWMAIFAWITSSSLAYIYGRDESFHEEYLSINGREYPRKSVLG
DGRSSEIKQTLAACLSRALPGLVANLRLPVPISIIEKEVGLLLETMSFVDALPAFRVKQW
QVIALLFVDALSVCRIPALTPHMTNRTMLLLKVLDGAKITSEEYEVMKDFMIPLGRAPHF
SMQSGA
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atggcttcagtgggtgtggcacctacttcttgcttgagagaatctagtggccacactgga
ggtgtagataaattgcctaaggagatgaatgacatgaaaattagggaggacaaggaaatg
gaagctacagttgttgatggtaatggaaccgagacaggtcatgtaatagtcacaaccatt
ggcggtagaaatggtcagcctaaacaggctatggcgaagtgcctaaacgacgccgtacac
aagctccaactctcgttactcgaaggcgtatccaccgatcatcaactctatactgccggc
tcgctcctttccaagagtgactacaacgacatcgtaacggaacgaaccatcgcgaacctc
tgtggctacccgctctgcttgcatcccctgccgctgtcggattctcgaaaacacaaaggg
cgataccacatctcgctaaaggagcacaaagtgtacgacctccaggaggtgtacttgttc
tgctccacgggttgtctggttaacagtaaggcgtttttggctagtttgggggaggagagg
gttagggttgtggacgagaggaggattgaagaggttttgaaggtggttggcgcagagagt
ggtgtggagagtgaggtggtgaggaggtttggggagctggagataagggagaaggatagg
ggggaaggtgaagttggggaagttgcagctgggccttcagatgctgttgaagggttcgtt
ccgaaggccaagtataagccgaagacgacaaaggtcaaaagggaaaagaatgaaggggag
gataaggcgaagagcaagtcttctcttgagaaaaacaaaggggttaatgctaagactaat
cagcagaatagtaaaaaggatacattttttagtgatgtgaatttcatgagtacgataatc
atgaatgatgaatatagcatttcgaaagtaccttctggttcaattggtatgacatcccag
ttgaaatatgaagaatcaaaaacaacaaaggatggtaaaaacttggaggctccacgtgcc
acgttgggctctttagcttccaaaacagaagattctgatacaattatgatggaatcaagt
gagaagagtcaaagtgcaaaagatgagcttgctattcaagaggttccttccacttcagct
cctctccagagtgattctagtatgatcactcttgaagcagaaagtgcctgtcctgctgag
aaagaacctgtattaagcgtaggaatgcccaaatcatctcttaaatcttcaggttcaaag
aaactctgtcgctcggtcacttgggctgatgagaaaactgatagttcaggtagtggaaac
ctttgtgaagttaaagaaatgggtgatggtgatggtgatgatgatgcattacgctttgca
tcagctgaagcttgtgcaatggcattgagccaggcagttgaagctgtggcttctggagat
tctgatgctgctgatgctgtttctgaagctggaattattatattaccacatccacttgat
gtggttggagaggaacaagtggagggtgtggatttgcttgaacctaaagaagcttcttta
aaatggtccagtaagcctgggattcaacgttctgaattctttgaccctgaggattcgtgg
tttgattctccacctgagggtttcaatttaagtttgtcgtcttttgcaacaatgtggatg
gcaatctttgcatggataacatcatcatctttggcttacatatatgggagggatgaaagt
ttccatgaagagtatctatcaattaatgggagggagtatcctcgaaagagtgttttggga
gatggtcgctcttctgaaatcaagcaaactcttgctgcttgtctatctcgggctttacct
ggacttgttgctaatctcaggctgccagtaccgatatctattattgaaaaggaagtggga
ctcttgttggaaacaatgtcttttgttgatgcacttccagctttcagagtgaaacaatgg
caagtaattgctcttctgtttgttgatgctctctccgtctgtcggatccctgctcttaca
ccgcacatgactaaccggacaatgctgcttctcaaggtgttggatggtgctaaaataact
tcagaagagtatgaagttatgaaggatttcatgataccccttggtcgagcacctcatttc
tcaatgcagagtggggcttaa
DBGET
integrated database retrieval system
