Mangifera indica (mango): 123208450
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Entry
123208450 CDS
T07684
Name
(RefSeq) LOW QUALITY PROTEIN: protein CHROMATIN REMODELING 20-like
KO
K10779
transcriptional regulator ATRX
Organism
minc
Mangifera indica (mango)
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
minc03000
]
123208450
03036 Chromosome and associated proteins [BR:
minc03036
]
123208450
Transcription factors [BR:
minc03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
123208450
Chromosome and associated proteins [BR:
minc03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
123208450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
AAA_34
ADD_ATRX
Motif
Other DBs
NCBI-GeneID:
123208450
NCBI-ProteinID:
XP_044481922
LinkDB
All DBs
Position
2:complement(21556357..21578325)
Genome browser
AA seq
1499 aa
AA seq
DB search
MEDKHEEVEDTESVSGDSFVADSDDDAPSISGQDDELHIEEHLTEEEIEELVAEFLEVES
KAAEAQEALEAESLAXVEGEVREELAQTLCENDLEVAVKDEMTAYREQWEAVLDELETES
AHLLEQLDGAGIELPSLYRWIENQAPNGCCTEAWKKRAQWVGSQVTSEMNKLITDAEEYL
QTQRPVRRRHGKLLEEGASGFLQKKLANDDNKEALTETTDLHWSSVNKIFSGDVSEECKF
GGKHWASVYLASTPQQATAMGLKFPGVDQVEEIEDIEDNANDPFVADAIANERELALSKE
QSKKFRKVKEEDDANIDRKLQLHLKRRWHRKRSKQGTAQKEVFSVEGVIESDSDEPRPFV
DSSDCLRRTKTHEDGEGIPDKNNEVAKQNLKTDLVESSGTSSNFDKARPMNNGTSSMSYS
SLLDSTELRGCKRSNESEEPYGDEKHICPIIIDCDEEANVVNDKSVCTKLEDHSVLHENA
NVSVTADYQFSQSLNEKFFCTACQKVASEVYPHPLMKVIICKDCKSLLERKMHVKDADCS
ECFCGWCGRSNDLISCKSCNVFFCTTCVERNISEACLSEILASSWQCCCCSPSLLQRLTL
EFEKAIGFGDLTVSSSESDSESSDADNNLTVGHKRKRKKKIRRILDDAELGEETKRKIAI
EKERQECLKSLQVQFSATSKMTSTATFEGDVPAAASTEVIGDANTGYIVNVVREKGEEAV
RIPPSISAKLKAHQVVGIRFMWENIVQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLY
TAMRSIDLGLRTALIVTPVNVLHNWKQEFMKWRPTEVKPLRVFMLEDVSRERRAKLLAKW
RTKGGVFLIGYAAFRNLSFGKHVKDRQMAREICHAYRFFSDGPDILVCDEAHMIKNTRAD
TTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIEIGQHT
NSTSEDVKIMNQRSHILYKQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRKLYKRF
LDVHGFANDKVSNEKIRKSFFAGYQALAQIWNHPGILQLKKEDRGSPSQEDAEDSSSDEN
LDFNVVMGEKPRNTNDVMQGKNDEGFFQQDWWKDLLREHTYKELDYSGKMVLLLDILIFC
SDIGDKALVFSQSIPTLDLIELYLSKLPRSGKQGKFWKKGKDWYRLDGRTESSERQKLVE
RFNEPFNKRVKCTLISTRAGSLGINLHAANRVIIVDGSWNPTYDLQAIFRAWRYGQKKPV
FAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRFISKEEMLHLFEFGDDENPDPLT
EVCPENGQENSQTTTCKIGNSLKHKLPLSHGSCTSDKLMESLLGKHHPRWIANYHEHETL
LQENEEERLSKEEQDLAWEVYRRSLKWEEVQRVPLDESAPDQKPVAMSNVAPPSQDTSNT
ATQPRGILRSRVVFRKCTNLSHLLTLRSQGTKPGCSTVCGECAQEIQWEDLNRDGKSAR
NT seq
4500 nt
NT seq
+upstream
nt +downstream
nt
atggaggacaaacatgaggaagtggaggatactgagagtgtttctggtgactcatttgtt
gctgactcagatgatgatgcaccatcaatttctggacaagatgatgaattgcatatcgag
gaacatttgactgaggaagaaatagaagagctagttgctgagtttttggaagttgagagt
aaggctgcagaggctcaggaagcacttgaagccgagtcccttgccnaagtggagggtgag
gttagagaggagttggcacaaactctctgtgagaatgatttggaggtggctgttaaagat
gaaatgactgcttatagagagcagtgggaagcagtgctggatgaactcgaaacagagagt
gctcacttgttggaacaacttgatggggctggtattgagttacctagcctatataggtgg
attgaaaatcaggctcctaatggttgctgcactgaggcttggaaaaaaagagcacaatgg
gtaggatctcaggtgaccagtgaaatgaacaagttgataactgatgctgaggagtatctg
caaacccaaaggcctgtaagaaggcgacatggtaaactattggaggagggtgccagtgga
tttctgcagaaaaaacttgctaacgatgataacaaagaggctctaacagaaactacagac
ctccactggagctctgtcaacaaaatattttctggtgatgtttctgaggagtgtaaattt
ggtggcaagcattgggcttctgtgtacttggccagtactccacagcaagctactgcaatg
ggactcaaatttcctggagtagatcaggtggaggagattgaagacattgaagacaatgcc
aatgatccgtttgttgcagatgccatagctaatgaaagagaactggctctctccaaagag
caaagtaaaaaatttagaaaggtcaaagaggaagatgatgcaaatatcgatcgcaagctt
caactacatttgaaacgaaggtggcatcgaaaaaggtcaaaacagggaactgctcagaaa
gaagttttctctgttgagggtgtaatcgaaagtgattcagatgagccccgaccttttgtt
gattcttctgattgtcttcgaagaactaaaacacatgaagatggggaaggcatacctgac
aaaaacaatgaggtagccaagcaaaatttgaagactgatttggttgaaagttctggaact
tcaagtaattttgacaaggcaaggccaatgaataatggcacttcttcaatgtcatattct
tctttgcttgattccactgaattaagagggtgcaagcgatccaatgagagtgaggagcca
tatggtgatgaaaagcatatttgtcctattatcatagattgtgatgaagaagctaatgtg
gtgaatgataaatcagtttgcaccaaattggaagatcattctgtcttgcatgaaaatgcc
aatgtttctgtcactgctgattatcaattttcccagagtttgaatgaaaagttcttttgt
actgcctgtcagaaggtggcctccgaagtttacccacatccacttatgaaagtaatcatt
tgcaaggattgtaaaagcctattggaacggaagatgcatgtgaaggatgctgactgctct
gagtgtttctgtggatggtgtggacgaagcaatgatttaataagttgtaagtcgtgcaat
gtatttttctgtaccacatgtgtggagaggaatattagtgaagcatgcttgtctgagatt
ctggcctcctcctggcaatgttgttgctgctctccaagtctcctgcaaagattgaccttg
gaatttgagaaagccattggttttggagaccttacagtttctagctctgaaagtgattca
gagagttcagatgctgacaataatctcacagtaggccataagagaaagcgaaagaagaaa
attcggaggattcttgatgatgctgagttaggagaagaaaccaaaagaaaaattgcaatt
gaaaaggagcgccaggagtgtctaaagtctttgcaagtgcagttttctgcaacatcaaaa
atgacaagcactgcaacttttgaaggcgacgtgccggctgctgctagtactgaagtgatt
ggtgatgccaatactggttatatagtgaatgttgtgagggagaaaggtgaagaagctgta
agaattccaccaagcatatctgctaaactgaaagctcatcaggtggtagggataagattt
atgtgggaaaatattgtacagtcaatcagaaaagtgaagtctggagataaagggcttggt
tgcattctggctcatacaatgggccttggcaaaacattccaggtcatagccttcttgtac
acagcaatgagaagtattgacttgggattaagaactgcacttattgtcacccctgtaaat
gtgcttcataattggaagcaagaattcatgaagtggagacctacagaggtgaaacctctc
cgtgtcttcatgttggaagatgtatcaagggagagaagagcaaaattacttgcaaagtgg
aggaccaagggtggtgtatttttaattggctatgctgctttccggaacttgtcctttgga
aaacatgtgaaggaccgccaaatggctagagaaatttgtcatgcttacaggttcttttca
gatggacctgatatacttgtttgtgatgaggcccatatgattaagaacaccagggctgac
acaactcaagccttgaaacaagtgaaatgccaaagaaggattgcattgactggatcacct
cttcaaaacaatctcatggaatattattgcatggttgattttgtaagggaaggtttcctt
ggtagcagtcatgagtttaggaaccgcttccagaatcctattgaaattggtcagcatact
aattcaacatctgaagatgttaaaatcatgaatcagaggtctcatatcctctataaacaa
ctgaaaggatttgtccagagaatggacatgaatgtggtgaagaaggacttgccaccaaaa
actgtctttgtaataactgtgaagctctctccattacagaggaaactatacaaaagattc
cttgatgtgcatgggtttgcaaatgacaaagtctctaatgaaaagataaggaagagcttt
tttgctgggtatcaggccttagctcagatatggaaccatcctggtatcttacaactgaaa
aaagaagataggggctctccgagccaagaggatgctgaggacagttccagcgacgaaaat
ctagatttcaatgtggtgatgggagagaagccaaggaatacaaacgatgttatgcaggga
aagaatgatgaaggcttttttcaacaggattggtggaaagatcttctgcgtgaacatact
tataaagagcttgactacagtggcaaaatggttttgctgcttgatattctaatcttctgt
tctgacataggtgataaagcattggtttttagccagagtataccaacattagacctcata
gagctgtatctttcaaaattacctcgatcaggcaaacaagggaagttttggaaaaaggga
aaggactggtataggctagatgggagaactgagagttctgaaaggcaaaagttggtagag
agatttaatgagcccttcaataaaagggtgaagtgtacattaatttcaactagagctgga
tctttggggataaatcttcatgctgccaaccgtgtaattattgttgatggttcctggaat
ccaacatatgatcttcaggctatatttcgtgcttggaggtatgggcagaaaaagccagtt
tttgcttaccgattgatggcacatggaactatggaggagaagatatataaacgtcaggtg
acaaaggaggggctagccgcaagggtggttgatagacaacaagtacataggtttatctct
aaagaagaaatgttacatctttttgaatttggtgatgatgaaaaccctgatcctcttact
gaagtctgtccagaaaatggacaagaaaacagtcagactacaacttgcaaaataggaaac
tcgctgaagcataagttgcctctttctcatggaagctgcacctctgacaagttaatggaa
agtttacttggcaagcatcatccaaggtggattgccaattaccatgaacatgagaccctt
ttgcaagagaatgaagaggaaaggctttcgaaggaggagcaagacttggcctgggaagtg
taccgaagatcattaaaatgggaggaagtgcaacgtgtaccacttgacgaatcagcacca
gatcaaaagcctgttgccatgtcaaatgtggctcctccctcccaagacaccagcaatact
gcaacacaacccagaggcattctgaggagtcgtgtagtgttccgtaaatgcactaatctt
tcgcatttgctaacacttagaagtcaaggcacaaaacctggttgcagcacagtatgtgga
gaatgcgctcaggaaatccagtgggaggacctaaatagggatggcaaatcagctaggtga
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integrated database retrieval system
