KEGG   Mangifera indica (mango): 123208877
Entry
123208877         CDS       T07684                                 
Name
(RefSeq) DNA repair protein RAD5A isoform X1
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
minc  Mangifera indica (mango)
Brite
KEGG Orthology (KO) [BR:minc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:minc03400]
    123208877
DNA repair and recombination proteins [BR:minc03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    123208877
SSDB
Motif
Pfam: SNF2-rel_dom UBA_RAD5A Helicase_C HIRAN zf-C3HC4_3 zf-RING_UBOX zf-C3HC4 zf-C3HC4_2 zf-RING_2 DEAD zf-C3HC4_4 Prok-RING_4 RING_XB3-XBAT31 zf-RING_5 ResIII zf-RING_4 zf-ANAPC11
Other DBs
NCBI-GeneID: 123208877
NCBI-ProteinID: XP_044482429
LinkDB
Position
2:19526901..19537098
AA seq 1028 aa
MATKVSDELLSTVRAIVGSEYSDMDIIRALHMANLNPTGAINIIFDTPNFKTPEIKVTPA
NPKVIVGKEQESRPLSENGNARFVCGVNGAGDGVIDLSMDEERKESTRKGSEWLFVGWSY
VSGMSTCKGRKLKCGDEVEFSFPLRNSSLPNKSFGRARQSMVACSEIVRFSTKSGGEIGR
IPNEWARCLLPLVRDKKVMIEGCCKHAPDVLSIMDTIVLSLRVYINNSMFRKHIQASLDT
GSNYSEDSVIHPIPNLFRLLGMTPFMKAEFTPSDLYTRKRPLESKVLSGIPPSLLQVNKF
KNQSRNENEIESEESISDADLDNIVGVGNSSELEELDPPSTLLCELRPYQKQALYWMAHR
EKGQSMDEAARTLHPCWEAYRLADEREPVVYLNSFSGDATTEFPSTLQMSRGGILADAMG
LGKTIMTLALILTQAERGTSSGSPSSSQHAGEPIEGVDISDKSMNLPKKEPKISVLDKLV
KKNNTLPRGGTLIICPMTLLGQWKAEIETHAEPGSLSLYVHYGPGRQKDANILVESDVVI
TTYGILTSEYSLENIENNGGLHSVQWFRVVLDEAHIIKSSKSQISIAAAALVADCRWCLT
GTPIQNNLADIYSLLRFLRLEPWGTWAWWYKLVQKPFEEGDERGLKLVQSILKPIMLRRT
KSSTDRFGRPILVLPPADIQVIYCELTDAEKDFYEALFKRSKVKFDKFVEQGRVLHNYAS
ILELLLRLRQCCDHPFLVMSRGDTQEYADLNKLAKRFLKGSHNELEGEAKEMPSRAYVQE
VVEELRKGGDGECPICLEAFEDAVLTPCAHRLCRECLLSSWRTPTSGLCPVCRKVINRQD
LITAPTDSRFTVDVEKNWVESSKIVVLLQELENLCKSGSKSIIFSQWTAFLDLLQIPLSR
NKITFLRLDGTLNQRQREKVLKQFSEDSNILVLLMSLKAGGVGINLTAASNAFVLDPWWN
PAVEEQAVMRIHRIGQKNRVVIKRFIVKGTVEERMEAVQARKQRMIAGALTDQEVRSARI
EELKMLFT
NT seq 3087 nt   +upstreamnt  +downstreamnt
atggcaaccaaggtttccgatgaactcttatcaaccgtccgagcgatcgtcggatcagaa
tactctgacatggacataatcagagccctacacatggctaatcttaatcccactggtgcc
attaacatcattttcgacactcccaattttaaaacccctgaaatcaaagttacacctgcc
aacccaaaagtgatcgtcggcaaagagcaggagagcaggccattgagtgaaaacgggaat
gctagatttgtttgtggggtgaatggagcaggagatggtgttattgatttgagtatggac
gaagagcgaaaagagtctactaggaaaggaagtgagtggttgtttgtggggtggagttac
gtatcagggatgtcgacgtgtaaggggaggaagttgaagtgtggcgatgaagtggagttt
tcgtttccattgaggaattcatctttgccgaataagagttttgggagagcaaggcaatca
atggtagcttgttcggagattgtgaggttttcaacaaagagtggcggagagattggtcga
ataccgaacgagtgggctcgatgtttgttaccgctggtgagggataagaaggttatgatt
gagggttgttgtaagcatgctcctgatgtcttgagcataatggatactattgttttgtca
ttaagagtctatatcaataattccatgtttcgtaagcacatccaagcctcactcgacact
ggaagcaattatagtgaggattccgttattcatcctattccaaatttgttccggttgctt
ggcatgactccttttatgaaggcagaatttactcccagtgatttgtatacaaggaagaga
cctttggaatcaaaggttctttctggtattcctccctcattattacaagtcaacaagttt
aagaatcagtctcgaaatgaaaatgaaattgaaagtgaggagtcaatttcagacgctgat
cttgacaacattgttggtgttggaaacagctctgagttagaggagttggatccccctagt
actcttctgtgtgaacttcgcccctaccagaagcaagccctttattggatggcacatcgg
gagaaggggcaatcaatggatgaggcagcaagaacccttcacccatgttgggaggcatat
cgtctagcagatgagagggagccggtggtctatttgaattcattttctggcgatgctacc
acagaatttccaagcacacttcaaatgtccagaggagggattctggcagatgctatgggc
cttggcaagaccattatgaccttagctctcatcctcactcaagcagaaagaggtacatca
tcaggtagtccgtcttcaagtcagcatgctggtgagcctattgaaggtgttgatatttca
gataaatcgatgaatctcccaaagaaggaaccaaaaatttcagtcttggataagctggtg
aagaaaaataatacacttccacgaggtggcactctgattatatgtcctatgaccctttta
ggccagtggaaggcagagatcgaaactcatgcagaaccagggtctctgtctttgtatgtt
cattatggaccaggtagacagaaggatgccaatattttagtcgagagtgacgttgttatt
actacctatggaatacttacatcagaatattctttggagaatattgaaaacaatggaggg
cttcactctgttcagtggtttagggttgttctcgatgaggcacatatcattaaatcaagt
aaaagccaaatttccatcgctgctgctgctcttgttgctgattgtcgctggtgtctcacg
ggcactccgatccagaacaaccttgcagacatatacagccttcttcgatttttgaggctg
gaaccatggggaacttgggcatggtggtacaaacttgtccaaaaaccatttgaagaaggt
gatgagagagggctaaagttggtccaatccattctaaagccaatcatgttaaggagaaca
aagtctagcactgatagatttggcaggcctattttagttctccctcctgctgatattcag
gttatatactgtgagctcacagatgctgaaaaagacttctatgaggccctttttaagaga
tccaaggtaaagtttgataagtttgttgagcaaggacgggttcttcataattatgcttca
atattggagttacttttgcgtcttcgccaatgttgtgatcatccatttcttgtgatgagc
cgaggtgatacgcaagaatatgcagatctgaataagctagctaagcgtttcctgaaaggg
agccataatgaactagaaggggaagccaaagaaatgccttcacgggcatatgtacaggag
gttgtggaggagctacgcaaggggggagatggagaatgtccaatatgtctggaagcattt
gaagatgcagtattgactccgtgtgcccaccgtttatgccgtgaatgtctcctgtcaagt
tggagaactcctacttctggattatgtcctgtttgcaggaaagtcatcaatagacaagat
cttattacagccccgactgatagtcgtttcacggttgatgttgagaagaattgggtggaa
tcatctaaaattgttgttcttttgcaagaacttgaaaatctttgcaaatcaggctccaag
agcattatatttagccagtggactgcctttttggacctcttgcagattcctctttctcgg
aacaaaattacatttcttcgtttggatggaactcttaatcagcggcaacgtgaaaaagtg
ttaaaacagttctcagaagatagcaacatcctggtgttgctgatgtcactaaaggctggt
ggggttggaataaatctaacagcagcttccaatgcttttgtcttggatccgtggtggaat
ccagccgtggaggagcaagctgtcatgcgcattcatcgtattggacaaaaaaacagggtg
gtgattaaacggttcattgtgaagggaacggttgaagaaagaatggaagcagtgcaagca
cgtaagcagcggatgattgcaggtgccttgaccgatcaagaagttagaagtgcccgcatt
gaggaacttaagatgctttttacttga

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