Mangifera indica (mango): 123208906
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Entry
123208906 CDS
T07684
Name
(RefSeq) U-box domain-containing protein 13-like
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
minc
Mangifera indica (mango)
Pathway
minc04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
123208906
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
minc04121
]
123208906
Enzymes [BR:
minc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123208906
Ubiquitin system [BR:
minc04121
]
Ubiquitin ligases (E3)
U-box type E3
123208906
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
U-box
HEAT_2
Neurochondrin
zf-RING_UBOX
MLKL_N
zf-C3HC4_4
Arm_2
zf-Nse
zf-C3HC4_2
HEAT_EZ
MCAfunc
RPW8
KAP
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
123208906
NCBI-ProteinID:
XP_044482471
LinkDB
All DBs
Position
2:17665465..17671348
Genome browser
AA seq
665 aa
AA seq
DB search
MEEDKGMLVQSLIDTVNDIASISDYRSTVKKQYCNLARRLKLLTPMFEEIKESKEEIPEE
TAKAFVSLKEALDSAKELLRFGSEGSKIYLVLERDEIMQKFFDVTAQLEQTLSAISYEKL
DISDEVKEQVELVLVQFRRAKGRVDSPNVELYEDLLSLYNKNNDAAIDPAVLRRLADQLQ
LMGISDLTQESLALHEMVTTSGGDPGESIEKMSMLLKKIKDFVQTENPNLDAPSKEKNLC
PSHGGQASSDRNHKAPVIPDDFRCPISLELMKDPVIVSTGQTYERSCIEKWLEAGHGTCP
KTQQTLSGTALTPNYVLRSLIAQWCEANGIEPPKRPSSSRPSKTSSACSPAERAKIEILL
SKLTSGNPEDQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLSTPDSRTQEHAVTAL
LNLSICEENKGSIVSSGAVPGIVHVLKKGSMEARENAAATLFSLSVIDENKVTIGGSGAI
PPLVTLLSEGTQRGKKDAATALFNLCIYQGNKGKAVRAGVVPTLMHLLTEPGGGMVDEAL
AILAILASHPEGKAAIGAAEAVPVLVEVIANGSPRNKENAAAVLVHLCGGDQQYLAEARE
LGVMSHLLDLAQNGTDRGKRKAAQLLERMSRFIEQQKQAQLQTENQSVSQTQSPQSSSMT
TGVDS
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagacaaaggaatgcttgtacagagtctgatcgatacagttaacgacatagcg
tcaatctcagattacaggagcacggtcaagaaacagtactgtaatttagctagaagattg
aagttgctgacaccaatgtttgaggaaatcaaagaaagcaaagaagagattccggaagaa
actgctaaagcttttgtttcgttgaaggaggctttagattcagctaaagagttgctcaga
tttggcagcgaaggcagcaagatttacctggtcctagaaagggacgaaattatgcaaaaa
ttctttgacgtgacagctcagttggaacaaactttaagtgcaatttcctatgagaagctt
gacatctcagatgaagtcaaagaacaggttgagcttgtccttgttcagttcagaagagcc
aaaggaagggttgactcacccaatgttgaactttatgaggaccttttgtccctttacaac
aagaacaatgatgcagcaatagatccagctgtcctaaggagattggctgaccaactgcaa
ttgatgggaatatctgacttgactcaagaatcactggctttacatgaaatggttactaca
tctggtggagatcctggggagagcattgagaagatgtcaatgctgttgaagaaaattaaa
gattttgtgcaaacagagaaccctaacttggatgctccttcgaaagaaaagaatctttgt
ccaagtcatggtggacaagcatctagtgataggaaccacaaggcccccgttataccagat
gacttccgttgtccaatatccctggagttgatgaaggatcctgtcattgtttcaactgga
cagacctatgagcgttcctgcattgagaaatggctggaagcaggacatggcacatgtccg
aagacacagcagactctctctggtactgcactcacacccaattatgtcctccgtagcctt
atagctcaatggtgcgaggcaaatggcattgaaccaccaaaacgacccagcagttcacga
cccagtaagacgtcatctgcctgttcacctgctgaacgcgccaagattgagattctcctt
agcaagctaacatctggtaaccctgaggatcagagatctgctgctggtgaaatccgtctt
cttgccaagcgcaatgcagataatcgtgttgccattgctgaagctggtgcaatccctctc
ctcgtaggcctgctttccacacctgactctcgtacccaggaacatgctgtcacagctctt
cttaacctttccatatgtgaagaaaacaaagggagtattgtctcatcgggggcggttcct
ggtatagttcatgtactgaaaaaagggagcatggaagcacgagaaaatgctgcagcaacc
ctatttagcctttcggtcattgatgaaaacaaagttactattggtggttctggagccatc
ccaccactggtcacacttctaagtgaaggtacccaaagggggaagaaggatgctgcaact
gctctctttaatttgtgcatctaccaagggaacaagggaaaggctgtgagggctggagtt
gttcctaccctgatgcatttgctgacagaacctggaggtggaatggtggatgaagcactg
gccatactagctatacttgctagccatcctgaaggaaaagcagccattggggctgctgaa
gcagtgccagtattggtggaggttattgcaaatggatctccaaggaacaaagagaatgct
gctgctgttttggtgcacctttgtggtggagaccaacaatatctagcagaggctagggaa
ctaggggtgatgagtcatctgttggatttggcacagaatgggacagacaggggcaagcga
aaggctgcacagttgctcgagcgaatgagtagatttattgagcaacaaaagcaggctcag
ttgcaaacagaaaatcaatccgtgtctcagacacaaagcccccagtcatcatcaatgaca
actggtgtggatagttga
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