Mangifera indica (mango): 123209050
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Entry
123209050 CDS
T07684
Name
(RefSeq) protein HIRA-like isoform X1
KO
K11293
protein HIRA/HIR1
Organism
minc
Mangifera indica (mango)
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
minc03036
]
123209050
Chromosome and associated proteins [BR:
minc03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
123209050
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_CAF1B_HIR1
Hira
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
ANAPC4_WD40
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_WDR35_TULP_N
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_EML
WDR90_beta-prop_4th
Beta-prop_IFT140_2nd
WD40_MABP1-WDR62_1st
Beta-prop_ELP1_1st
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
123209050
NCBI-ProteinID:
XP_044482708
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Position
2:complement(19781264..19789956)
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AA seq
1147 aa
AA seq
DB search
MIAEKPGWVRHEGMQIFSIDIQPGGLRFATGGGDHKVRIWNLKSVGRSLENDESTQRLLA
TLRDHFGSVNCVRWAKHGRYIASGSDDQVILVHERKPGSGTTEFGSGEPPDIENWKVAMT
LRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMNNGICIAVLRGHSSLVKGVAWDPIGS
FIASQSDDKTVIIWRTSDWNLAHRTDGHWAKSLGSTFFRRLGWSPCGHFITTTHGFQKPR
HSAPVLERGEWAATFDFLGHNAPIIVVKFNHSMFRRNSSDLQEVKAGPVGWTNGPSKIGG
KESQPYNVIAIGSQDRTITVWTTASPRPLFVAKHFFSQSVVDLSWSPDGYSLFACSLDGT
IATFHFEANELGCRLSDDELDELKRSRYGDVRGRQANLVESPAQLLLETASAKQNTTKKV
VSNVQPIQAPSKSSVNVEVTTKTSEPQVDDAKKNGGAVGDGGLNKVATSGRISSPVKQKE
YRRPDGRKRIIPEAVGLPVQQESIPGGATSQTLEFPLVPCDNRKNNGVVLMDGGTREVVR
GTLGRSSDMKERTGVTARATVTESLVIEKVLVPAGGDGSVNVEQSGSSKASGSLATYSTT
LSIRVFDKKEAVDTVPVCLEACPREHAVNDIVGMGNTCMMKETEVVCKRGTQTLWFDRII
GKVTVLAGNANFWAVGCEDGCLQVYSKCGRRAMPTMMLGSAATFMDCDESWKLLLVTRKG
SLYVWDLFNRKCLLHDSLASLITEDLISSTKGAGKIKVISAKLSKSGSPLIVLATRHAFL
FDTSLMCWLRVADDCFPASNFASSWNFGSVQSGELAALQVDVRKYLARKPGWSRVTDDGV
QTRAHLESQLASSLAMRSPNEYRQCLLSYIRFLAREADESRLREVCEGFLGPPTGMVEAT
STSEDLKNTTWEPCVLGMRKHKLLREDILPAMATNRKVQRLLNEFMDLLSEYESTEINIE
QKDPASPTISALATDQMDSAPPATDQVNSTLPDIDQMDSAPIGIDIMDSTPLVINQMANT
TPATNQMDTNLAASDKMDSALPATDQMDCTSTSTDQMDCTSASTDQMEPAPQATDQLEPV
PPAIDQMDSASLATDQEDSITLATDGTDPAALASDKVNSVLPMTEQVNLEPVPDQGNLAP
AAQDSGS
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atgattgcggagaaacctggttgggttaggcatgagggaatgcagattttctccattgat
attcagcctggtgggctcaggtttgctactggtggaggtgaccacaaggttcgaatttgg
aacttgaaatcggttggtaggagtttggaaaatgatgaatcaacacaaaggcttcttgca
acacttcgtgatcattttgggtcagtcaactgcgttaggtgggctaagcatggtcggtat
attgcatcagggtctgatgatcaggtgattttggttcatgagaggaagcctggttctgga
actactgagtttggtagtggagagcccccagatattgagaactggaaagttgctatgact
ttgagaggacacactgccgatgtggtggatcttaattggtctcctgatgactcaatattg
gctagtggaagtttagacaacaccatccatatatggaatatgaacaatggcatatgtatt
gctgttcttaggggtcattcaagcttggttaaaggagtagcctgggatcctattggctcc
ttcatagcgagtcaatctgatgataagactgtcattatatggcgaacaagtgattggaat
cttgctcacagaactgatggccactgggcaaaatcattgggatctacattttttagacgg
cttggatggtctccttgtggccatttcataacaactactcacggtttccagaagccaaga
cattcagcacctgttttagagagaggagagtgggcagcaacatttgacttcctaggacat
aatgccccaattatagtggtgaagtttaatcattcaatgttcaggaggaattcctccgat
ttacaagaagtgaaagctggacctgttgggtggacaaatgggccatctaagattggaggg
aaagaatcgcagccgtacaatgttattgcaattggaagtcaagatcgtactattactgta
tggactacagctagtcctcgccctctctttgtagccaagcattttttttctcaaagtgtt
gtggatttatcctggagtcctgatgggtattcactttttgcatgttccttagatggaaca
attgctactttccactttgaggcaaacgaattgggttgtagattgagtgatgatgaactt
gatgagttaaagcggagtcgttatggtgatgtcagaggtcgacaagcaaatctagtagag
agtccagcacaattattgctggaaacagcctcagctaagcaaaatacaactaaaaaagtg
gtttcaaatgttcaaccaattcaggcaccttcaaagtcttctgtcaatgtagaagttacc
acaaagacttctgaacctcaagttgatgatgcaaagaaaaatgggggagctgttggtgat
ggtgggttgaataaagtggcaacttcaggccgaatttctagtccagtaaaacaaaaagaa
tatagacgccctgatggtagaaagaggatcattccagaagcagtgggtctgcctgttcag
caggaaagtattccaggcggtgcgacatctcaaacgcttgagttccctcttgtgccatgt
gataacagaaagaataatggggtggttctcatggatggtggtacaagagaagttgtgagg
gggacactaggcagaagctctgacatgaaggagcgtactggagttactgccagggctact
gttactgagagcctggttattgagaaggttttggtacctgcaggtggagatggaagtgtt
aatgtggaacagtctgggagttcaaaggcttctggttctttggctacttacagtacaact
ctttctattagggtatttgataagaaagaagcagtagatactgtaccagtttgcttggaa
gcttgtccgagagagcatgctgtaaatgacattgttggaatgggaaatacatgtatgatg
aaagaaacagaagttgtttgcaaaagaggaacccaaactctttggtttgacaggattatt
gggaaggtcactgttttagctggaaatgctaacttctgggctgttgggtgtgaagatggt
tgcctacaggtttattctaaatgcggaagacgtgctatgccaaccatgatgctgggatca
gctgccacatttatggactgtgatgagagttggaaattgttacttgtcacaaggaaggga
tccttgtatgtatgggatctcttcaacaggaagtgtctgcttcatgattcattggcatct
cttatcactgaagatctgatttcatctactaaaggtgcaggcaaaatcaaagtcatatct
gccaaattatcaaaatcaggttctcccctcattgttctggccacacgccatgcgttcctc
tttgacacaagtctcatgtgctggctgagggttgcagatgattgctttccagcatcaaat
tttgccagctcctggaattttggttcagttcagagtggtgagctggctgcattgcaggtg
gatgttaggaaatatttagcgagaaagccaggctggagcagggtaactgatgatggagtg
cagacacgtgctcatttggaatctcagttggcatcttcgttggctatgagatctcccaat
gaatatcgccagtgcctcctttcctacatccgctttctagcaagggaagcagatgagtct
cgtttacgagaagtttgtgaaggttttcttggacctccaactgggatggttgaagccaca
tccacatctgaagatttaaagaatacgacatgggaaccttgtgtgcttggaatgagaaag
cacaaacttttaagagaggatatacttcctgcaatggcaacaaataggaaagtccagcgg
ttgctcaatgagtttatggatctcctgtctgaatatgaaagtactgaaattaacatagag
caaaaagatcctgcatctcccactatatccgcattagcaactgaccaaatggactctgct
ccacctgctactgaccaagtgaattctaccctaccggatattgatcaaatggactctgcc
cctataggaattgatataatggactccaccccattggtgattaaccaaatggccaacacc
acaccagcaacaaaccaaatggacacgaacctagcagcatctgataaaatggactctgcc
ctgccagcaactgaccagatggactgtacctcaacatcaaccgaccagatggactgtacc
tcagcatcaaccgaccagatggaacctgccccacaagcaactgaccagctggaacctgtc
ccacccgcaattgatcagatggactctgcttcccttgcaactgatcaagaggactccatt
acactggctacagatgggacggaccctgcggctctggcatcagataaagtgaattcagtt
ttaccaatgacagaacaagtaaatttagaacctgtaccagatcaaggtaatcttgcccca
gctgcacaagattctggttcctaa
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