KEGG   Mangifera indica (mango): 123209117
Entry
123209117         CDS       T07684                                 
Name
(RefSeq) WD repeat-containing protein 48-like isoform X1
  KO
K15361  WD repeat-containing protein 48
Organism
minc  Mangifera indica (mango)
Pathway
minc03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:minc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    123209117
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:minc03400]
    123209117
DNA repair and recombination proteins [BR:minc03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     123209117
SSDB
Motif
Pfam: WD40 WD40_Prp19 DUF3337 WD40_WDHD1_1st WDR55 WD40_CDC20-Fz Beta-prop_TEP1_2nd EIF3I Beta-prop_EML_2 Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 NBCH_WD40 Beta-prop_SPT8 WD40_MABP1-WDR62_2nd Beta-prop_SCAP Beta-prop_TEP1_C Beta-prop_IFT122_1st Beta-prop_EIPR1 WD40_RFWD3 Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd Beta-prop_DCAF12 Beta-prop_DCAF4 RAWUL WD40_MABP1-WDR62_1st ANAPC4_WD40 PAN2_N Beta-prop_Nup120_160 VWA_3_C
Other DBs
NCBI-GeneID: 123209117
NCBI-ProteinID: XP_044482819
LinkDB
Position
2:complement(20523445..20531377)
AA seq 782 aa
MTHDLIIYMFVTIMVMMGIAMHRVGSASNNTNSTRPRKERRLTYVINDADHTKHCAGINC
LAVSKASATDGCDYLFTGSRDGTLKRWTLAEDAASCSATLESHVDWVNDAVLAGDNTLVS
CSSDTTLKTWNCFSDGTCTRTLRQHSDYVTCLAAAEKNSNIVASGGLGGEVFIWDIEATA
TPLSKPSDAMEEDCSNGVNGFGNSLPITSLRTISSSNSISVHTSQSHGYVPVAAKGHKES
VYALAMNDSGTLLVSGGTEKVVRVWDPRTGSKTMKLRGHTDNIRALLLDSTGRFCLSGSS
DSMIRLWDLGQQRCVHSYAVHTDSVWALASTPTFNHVYSGGRDLSLYLTDLATRESLLLC
TGEHPILQLALHDDNIWAATTDSSVHRWPAEGRNPQQVFQRGGSFLAGNLSFSRARVSLE
GSTLVPVYKEPTFTIPGTPGIVQHEILNNRRHVLTKDTAGSVKLWEITRGIVVEDYGKVS
FEEKKEQLFEMVSIPAWFTVDTRLGSLSIHLDTPQCFSAEMYSADLQIAGKPEDDKVNLA
RETLKGLLVHWLAKRRHKVGSQASANGDVLSGKDITTRSFTHSRIEVDVNAENDSMVYPP
FEFSTISPPSIITEGSQGGPWRKKITDLDGTEDDKDFPYWCLDCVLNNRLPPRENTKCSF
YLHPCEGTAVQVLSQGKLSAPRILRIHKVVNYVVEKMVFDKPSDGVNSDGKFPGLAGGPL
QHSAVGDSFQSGLKPWQKNKPSIEILCNNQVLSSEMSLATVRAYVWKKPEDLVLNYRVIQ
GK
NT seq 2349 nt   +upstreamnt  +downstreamnt
atgacacatgaccttataatttatatgtttgttaccatcatggttatgatgggaattgcg
atgcaccgggtgggtagtgcgagtaacaacaccaattctactcggccccgtaaagagagg
aggttgacatatgtgataaatgatgctgatcacacgaagcattgtgctggcataaactgt
ttggctgtatcaaaggcatcggcaactgatggctgcgattacctattcacgggaagccga
gatggcacattaaagagatggacactggctgaagatgctgctagctgctctgctactttg
gagtcacatgttgattgggttaatgatgctgtacttgcaggtgataatacacttgtttcc
tgctcttcagatactaccctcaagacatggaattgcttttctgatggaacttgtaccagg
actctgcgtcagcactctgactatgttacttgtctcgcagcggcagaaaaaaatagcaat
attgttgcttctggtggtcttggtggggaggttttcatatgggatattgaagctacagct
actccactttcaaaaccaagtgatgcaatggaagaagattgttcaaatggtgtcaatggt
tttgggaattctttaccaataacaagtttgcgaactattagttcgagcaacagcatttct
gtgcacacaagtcagtcacatggatatgtacctgttgctgcaaaaggccataaggagtct
gtctatgcgttggctatgaatgatagtggaactcttcttgtctctggtggaactgagaag
gttgttcgtgtttgggacccaagaactggttcgaagactatgaagctaagagggcatacg
gataacattagagctctgcttctagattctactggcaggttttgcttatcgggatcctct
gactctatgatcaggttatgggatcttggtcaacagcgatgtgtgcattcttatgctgtg
catacagattctgtttgggcacttgcaagcaccccaacatttaatcatgtttatagtggt
gggagagacctctctttatacttgacagacttggcaacaagagagtctcttctgctttgc
acaggggaacaccccattctgcaattagcattgcatgatgataatatatgggctgcaacg
actgattcatcggttcataggtggccggctgaaggacgtaatcctcaacaagtctttcaa
agaggtggttcattcttagctggaaatttgtcattttcaagggcaagggtttccttggaa
ggatctaccctggttcctgtttataaagaaccaacttttacaattcctggaaccccagga
atagtgcagcatgaaattttaaacaaccgaaggcatgtcttgactaaggatactgctggt
tcagtaaagctatgggaaatcacccgaggcattgtggttgaggactatggaaaggtatcg
tttgaggagaaaaaggaacagttatttgagatggtaagcattcctgcatggttcactgtg
gataccaggctcggaagtttgtccattcatttagacacaccacaatgcttctctgcagag
atgtattcagcagaccttcaaattgctggaaaacctgaggatgataaggttaatctggct
cgtgaaacacttaaaggtttattggttcattggctggccaaaagaaggcacaaagtgggt
tcacaagcttctgctaatggggatgttttgtctggcaaggatatcactactagaagcttt
acccattcaagaattgaggtggatgttaatgctgaaaatgattccatggtctatcctcca
tttgaattttcaaccatttccccgccatcaataattactgagggttctcaaggaggtcca
tggagaaaaaaaattaccgacttagatggaactgaagatgataaggacttcccttattgg
tgtcttgattgtgttttgaataatcgcttgcctcccagagaaaataccaagtgtagcttt
tacctgcatccatgtgaaggtacagctgtgcaggtcctgagccaggggaaactaagtgca
cctcgaatattgagaatacacaaggttgttaattatgtcgtggagaagatggtttttgac
aaaccatcagatggtgtaaattctgatggaaaatttcctggtcttgctggaggtccatta
cagcattcagcagtgggagattcgttccaatctggtttgaagccatggcaaaaaaataaa
ccttcaatagagatcttgtgcaataatcaggtattatcttcagagatgagtttagctact
gtgagggcatatgtatggaagaaacctgaggacttggttcttaattacagagttatccag
ggaaagtga

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