Mangifera indica (mango): 123209249
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Entry
123209249 CDS
T07684
Name
(RefSeq) RNA polymerase II-associated protein 3 isoform X1
KO
K23002
RNA polymerase II-associated protein 3
Organism
minc
Mangifera indica (mango)
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
minc03021
]
123209249
Transcription machinery [BR:
minc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
123209249
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP3_C
TPR_1
TPR_2
TPR_8
TPR_BSK1_C
TPR_12
TPR_11
TPR_10
TPR_9
TPR_16
ANAPC3
ARM_TT21_C
Coatomer_E
Motif
Other DBs
NCBI-GeneID:
123209249
NCBI-ProteinID:
XP_044483073
LinkDB
All DBs
Position
2:complement(24236871..24242065)
Genome browser
AA seq
461 aa
AA seq
DB search
MSKHTRDQALDFQGFLNDLQDWEFSLKDKDRDKRMKTQASQKDNLKVGEKLRPSGNTSIV
DSYSNNYDAVSRISSSFMTEESLPDATSEKELGNEYFKQKKFKEAIDCYSRSIALSPTAV
AYANRAMAYLKIKRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKFKESIEDSEFAL
RLEPQNQEVKKQYTEVKSLYEKEILQRASGKLKSSVQGMGKVGKPGIKVNGGEGCAVPNT
TQKTGVVYIQENHSKASNGENTGRTSLCVEESEDRSIGGRSKAKGQQDVSRADAIRSHGL
EKGNCRTRRHNLNPSVQELASRAASRAIAEAAKNITPPKSAYEFEVSWRGFSGDCSLQAC
LLKATSPSALPQIFKNALSAPILIDIINTVATFFTEEIDLAVKYLENLTKVPRFDMLIMC
LSSEDKADLQKLWDETFCNEATLIEYADILDNLRSKYCLNR
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagcacactcgcgatcaagctctggatttccaggggtttttgaatgacttgcag
gactgggaattttctctcaaagacaaagacagagacaaaagaatgaagacccaggcttct
caaaaggataatctgaaagttggtgaaaagcttagaccaagtggaaatacatctatagtc
gattcttattctaataactatgatgctgttagccgcatatcaagtagtttcatgactgaa
gagagtcttccagatgctacttcagagaaagaactgggtaatgagtatttcaagcagaag
aagtttaaagaagctattgactgctattcaagaagcattgccctgtctcccactgcagta
gcctatgcaaatagggctatggcctatcttaaaatcaagagattccaggaagcagaggat
gactgtacagaggccctaaatctagatgatcgctacataaaagcatactcacgtcgagct
acggctagaaaagaacttgggaagtttaaagagtccattgaggattcagagtttgcctta
aggttggagcctcaaaaccaagaagtcaagaaacaatatactgaggtcaaatctttgtat
gagaaagagattcttcagagggcatctggaaagcttaaaagttctgtacaaggaatgggg
aaagttggaaagccagggataaaagtgaatggaggtgaaggctgtgctgttccaaatacc
actcagaagactggagtggtatatattcaagaaaatcattctaaggcaagtaatggagag
aatactggaagaacttctctctgtgtggaagaatcagaagacagaagtattggaggtcga
agcaaagctaaaggtcagcaagatgtttctcgagcagatgctatacgaagtcatggtttg
gagaagggcaattgtagaaccagaagacacaacttgaacccatctgttcaggaacttgct
tctcgagcagcatctcgagccattgctgaagctgcaaaaaacatcacacctccaaaatca
gcttatgaatttgaggtttcttggcgaggcttctctggtgattgctccctacaggcttgt
ctgttgaaggctacttctccttctgcactgccccagatatttaaaaatgccttgtctgct
cctatactaattgatatcattaacacagtagcaacctttttcactgaagaaatcgattta
gctgtcaaatatcttgaaaatttaaccaaggtcccaagatttgacatgctcatcatgtgc
ctttcatctgaagataaagctgatctccagaaattatgggacgaaacattttgcaatgaa
gctactctaatcgagtatgctgatattcttgataatttgcgttcaaaatactgcctcaat
cgctaa
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