Mangifera indica (mango): 123209255
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Entry
123209255 CDS
T07684
Name
(RefSeq) pre-mRNA-splicing factor 38 isoform X1
KO
K12849
pre-mRNA-splicing factor 38A
Organism
minc
Mangifera indica (mango)
Pathway
minc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123209255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
minc03041
]
123209255
Spliceosome [BR:
minc03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
123209255
Complex C
U4/U6.U5 tri-SnRNP related factors
123209255
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Gene cluster
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
HIND
Motif
Other DBs
NCBI-GeneID:
123209255
NCBI-ProteinID:
XP_044483091
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Position
2:complement(24033999..24037747)
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AA seq
398 aa
AA seq
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MANRTDPAAKSIRGTNPQNLVEKIVRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT
FGGNRKPTPFMCLIMKMLQIQPEKDIVVEFIKNDDYKYVRVLGAFYLRLTGTDVDIYRYL
EPLYNDYRKLRRKLADGNFSLTHVDEVIDELLTIDYSCDIALPRIKKRWNLETIGALEPR
KSVLEDDFEEEEEKEENDQLDDGMEDEAYEKDYHHGRSPARDRDRDRDRDRDRDRDRRRD
SYRYRDRDYDRDRDYDRDRDYDRDYDRERGRGRDRDRGRDRDRDRYRLREEKEYGRERER
EREREGRDRDRDRRDRDRGRRRSRSRSPSPSRDRKRYARSSMSPRRHAEEPEDAGTRAEP
KKKKEKKEKKDDGTDHPDPEIAEANRIRASLGLKPLKL
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaccgtacggacccagcagcgaagagcatcagaggaacgaaccctcaaaacttg
gtggaaaagatcgtacgatcaaagatatatcagaacacgtactggaaggaacaatgtttc
ggattgacggcggagacgctcgttgacaaagctatggaactcgaccaccttggcggaacc
ttcggcggcaaccggaaaccaacacccttcatgtgtctcatcatgaaaatgcttcaaatc
cagccggagaaagatatcgtcgttgagttcatcaaaaacgacgattacaagtatgttcgt
gttctgggagccttttatttgcgacttactgggactgatgttgatatctatcgttacctt
gagccattgtacaatgactatagaaagttgagacgaaagttagcagatggaaatttttct
ttgactcatgtggatgaggtaattgatgaacttctgacaatagattactcatgtgacatt
gctttgcctcgcattaagaaaagatggaatcttgagaccattggtgcactggagcctaga
aagagtgttttggaagatgacttcgaagaggaggaagagaaagaggaaaatgatcagctt
gatgatggaatggaagacgaggcttatgaaaaggattatcaccatgggagaagccctgca
agggacagagatagggatagagatagggacagggacagagatagagatagaagacgcgac
agttacagatacagggatcgtgattatgatagggatagggactatgacagggatcgggac
tacgatagagattatgacagggaaagaggacgtggtcgagatagggatagggggagggat
agagacagggatcggtatcgattgagagaagagaaggaatatggtcgtgagagggagcga
gaaagagagagggaagggagggatagggaccgtgatagacgagatagggatcgtggaagg
cggaggagccgttctaggagccctagccccagtagggatcgcaagagatatgctcgcagc
agcatgagtcctagaagacatgcagaggaaccagaggatgccggcacccgtgcagagcca
aagaagaagaaagagaagaaggaaaagaaggatgatgggacagaccatccagatccagaa
attgctgaggctaacaggatacgagcatcccttgggttgaaaccgttaaagttataa
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