Mangifera indica (mango): 123209321
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Entry
123209321 CDS
T07684
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase HRD1B-like
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
minc
Mangifera indica (mango)
Pathway
minc04120
Ubiquitin mediated proteolysis
minc04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
123209321
04120 Ubiquitin mediated proteolysis
123209321
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
minc04121
]
123209321
Enzymes [BR:
minc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123209321
Ubiquitin system [BR:
minc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
123209321
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
FlxA
zf-C3HC4_3
zf-ANAPC11
zf-RING_16
zf-RING_11
zf-RING_5
zf-HC5HC2H
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
123209321
NCBI-ProteinID:
XP_044483235
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Position
2:complement(7384293..7390070)
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AA seq
534 aa
AA seq
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MRLPTYAGFSLTLTIAVIYHAFSSRNQFYPAMVYLSTSKINLALLLNMGFVVMCILWQMI
KRLFLGKLREVEVERLNEQSRREIMEILFAITIFRQDFSVSFLAMVTTLLLIKALHWLAQ
KRVEYIETTPTVPMLSHVRIVSFMGFLLLLDSLFLYSSVKFLIQTQKASVSLFFSFEYMI
LATTTVSIFVKYIFYVSDMLMEGQWERKAVYTFYLELIRDLLHLSMYLCFFLVIFMNYGV
PLHLIRELYETFRNFKIRVADYVRYRKITSNMNDRFPDATPEELNANDSTCIICREEMTT
AKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPDGGANRAGGHGPGPDAHQSGTGTST
AAQGSADNNLSQQQARLQAAATAASIYGKSFVYPSPNSLVWSSGYVVLPQSCRPLGDATN
VESPAKQASGGQQHFQNLGASMSFPFAQFPQGFIPFQSPGANVTYGERLEAQKFIKHQIE
VLEDQLQQLQKSKPEVSSEKDSSELSDGRGKTVASSSFSVSDSGHHSEKEETAS
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgaggctgccgacgtatgcggggtttagtttaactcttactatagcggttatttaccat
gcttttagtagtagaaaccaattttatcctgctatggtttatttatcaacttccaagatc
aatttggcgcttcttctgaatatgggttttgtggtaatgtgcattttgtggcaaatgatc
aaacggttattccttggcaagctccgggaagtggaggttgagaggttgaatgagcagtct
aggagggagatcatggagattctgtttgcaattactatatttcggcaggacttttcagtt
tcattccttgctatggttactacattgttgttgatcaaagctttgcattggttggctcag
aagagggtggagtacattgaaacgaccccaactgtcccgatgttgtctcatgttcggatt
gtttcatttatgggtttcctccttcttctggattctctttttttgtatagttctgttaag
tttttgatacaaacacaaaaggcttctgtttctctcttcttttcgtttgagtacatgata
ctggcaacaacgacggtgtcaatatttgtaaaatatattttctatgttagtgacatgctt
atggaaggacaatgggaaagaaaggctgtttacaccttctacctggaacttattcgtgac
ttgcttcatttgtctatgtacctgtgtttctttcttgtgatatttatgaattatggtgtt
ccactgcacttgatacgagagctttatgagacattcaggaactttaagattcgtgttgct
gattatgttcgttatcggaagattacttcaaatatgaatgatcgatttccagatgctacc
cccgaagagcttaatgcaaatgattcaacctgcattatatgccgtgaggagatgacaacg
gccaagaaattagtttgtggacatctctttcatgttcattgcctccgctcgtggttagag
cgacaacatacctgtcctacatgcagagctctagttgtaccacctgatggtggggcaaat
agagctggaggacatggaccaggaccagatgctcatcagtcaggtacaggcacttcaaca
gctgcacagggttcagctgacaataacttgagccagcagcaggccaggcttcaggccgct
gccactgccgcttcgatatatgggaaatcctttgtttatccatctccaaactcactagtg
tggtcttctggatatgttgtactacctcagtcctgtaggcctttgggtgatgccaccaat
gtggaatctcctgcaaaacaagcttccggtggacaacagcactttcagaatctgggtgca
tctatgtccttcccctttgctcaatttccacaggggttcatcccttttcagtcacctggt
gctaatgtgacatatggagaaagattggaagcacagaagttcatcaagcaccagattgag
gtcttggaagaccagcttcaacaactacaaaagtcaaaacctgaggtaagttctgagaag
gattcttctgaattatcggatggcagaggaaagactgttgcttcttcttcattctcggtt
tctgactccggccatcatagtgaaaaagaagagacagcttcatag
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