Mangifera indica (mango): 123209327
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Entry
123209327 CDS
T07684
Name
(RefSeq) regulation of nuclear pre-mRNA domain-containing protein 1B-like
KO
K15559
regulator of Ty1 transposition protein 103
Organism
minc
Mangifera indica (mango)
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
minc03021
]
123209327
Transcription machinery [BR:
minc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
123209327
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
CID
CTK3
CENP-K
CREPT
TMF_DNA_bd
Motif
Other DBs
NCBI-GeneID:
123209327
NCBI-ProteinID:
XP_044483251
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All DBs
Position
1:9524282..9528751
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AA seq
526 aa
AA seq
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MNSVFSEQILADKLSKLNGTQQCIETLSHWCIFHQSKAELVVTTWDKQFHSSSMVQKVPL
LYLANDILQNSKRKGNEFVTEFWKVLPSALKDVVEKGDDHGKKVVSRLVNIWEERRVFGS
RGRSLKDVMLAAGDVPPPPLEFSGKKRSRSVRIVKRDSRSIRTKLSIGGAAEKIVSAYHL
VLSERPSEEEEMAKCKSGVHRVRKMEKEVDVVCTIAEDPKRKSLASELEKEEHLLKQCIE
KLKSVEANRVALVSQLKEALHEEESELENVRTQMQVAQGQAEEACNMRKRLNDEDHVSKL
STMTTPSVDTNTKAGQTPKRTAAAIAAEVADKLTASSSSQMIMHSVLSTFAAEEAKNAGL
VKASTSSNSFTSIPVNSVTDAIAKSEKPMAISDPNKFLPAQSLTVPPNQSYQTILVPQPT
LPSQASTSQAQYHMLSNPPPQQYMQPSGGIMTPFGYSSISSMPAGPPPPHMVSPMVPLVQ
QPIPLAQQPAPMNQQIPMLTQQPPAPPSFRPLQPPGLVYYGHPPHS
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgaatagcgttttcagtgaacagatacttgcagacaagctctccaagctcaacggcacc
caacagtgtattgaaacattgtcacactggtgtatatttcaccagagcaaagcagagctg
gtggttacaacatgggataaacaatttcacagttcgtcaatggttcagaaagttcccctt
ttgtatcttgcaaatgacatcctacagaacagtaagcgtaaaggaaatgaatttgttact
gagttttggaaagtccttccctcagctctcaaagacgttgttgagaaaggggatgatcat
ggaaagaaggttgtctctagattggtcaatatatgggaagaaaggagagtctttgggtcc
cgtggacgaagcctcaaagatgtgatgcttgctgctggagatgtgcctccaccacccttg
gagtttagcggcaaaaaacgttcacgctcagtcagaattgtgaaaagagattcccgatcc
attagaacgaaattatctattggaggtgcagctgaaaaaatagtgtcagcatatcacttg
gtgctcagtgaacgtcccagtgaagaggaggagatggctaagtgcaagtcaggggttcat
cgcgtgaggaagatggagaaagaggttgatgttgtctgtaccattgcggaagatccaaag
cgaaaatccttggcctctgaactagagaaggaagaacatcttttgaaacaatgtattgag
aaacttaaatcagttgaagccaatagagtagcacttgtatctcagttaaaagaagctctc
catgaagaggaatctgaactggagaatgttcgaactcagatgcaggtagctcagggtcag
gcagaggaggcctgcaacatgcggaagcgactcaatgatgaagatcatgtatcaaaacta
tctactatgactaccccatcagttgatactaacacaaaagctggacaaacaccaaagagg
acagctgcagctattgcagctgaagttgcagacaagcttacagcttctagctcgtcacaa
atgatcatgcactctgttctctctacatttgcagctgaagaagcaaagaatgctggttta
gtaaaggcttctacatcatcaaactcattcacatccatacctgtcaattcagtgactgat
gcgattgcaaagtctgagaagcctatggcgatttcggatcccaacaagtttttgccagct
cagtcacttaccgttcctcccaaccaatcatatcagaccattttggtaccccaaccaact
ctgccaagccaggcctcaacctcgcaagctcaatatcacatgctttctaacccaccaccc
caacaatatatgcagccatcaggtggaatcatgaccccattcggctacagtagcatttca
tccatgccagcaggacctcctccacctcatatggtcagtccaatggttcctttggttcaa
caaccaattccattagcgcagcaaccagcacctatgaatcagcagatacctatgttgaca
cagcagcccccagcacctcctagtttcaggccactacagccgccgggactggtatattat
ggtcatcctccccattcctaa
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