Mangifera indica (mango): 123209463
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Entry
123209463 CDS
T07684
Name
(RefSeq) DDB1- and CUL4-associated factor 8
KO
K11804
DDB1- and CUL4-associated factor 8
Organism
minc
Mangifera indica (mango)
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
minc04121
]
123209463
Ubiquitin system [BR:
minc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
123209463
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
EIF3I
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
WDR55
Beta-prop_EIPR1
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_SPT8
Beta-prop_IFT122_1st
Beta-prop_WDR35_TULP_N
VPS8_N
Beta-prop_IFT140_1st
NBCH_WD40
PROPPIN
PGM_PMM_III
Motif
Other DBs
NCBI-GeneID:
123209463
NCBI-ProteinID:
XP_044483469
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All DBs
Position
2:complement(18276741..18279602)
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AA seq
478 aa
AA seq
DB search
MKTSFKGTRDGFTEIYRREMGLSRPRDVTRWFAASEELVKQINLNGKLNGHEGCVNAVEF
NSTGDHLVSGSDDKNVIFWTWKTGRKLFSYPSGHFDNIFQTRIMPFTDDCKIVTSAADGQ
VRFGQVSEDGQVDTKRLGRHQGRVYKLAVEPGSPYILYSCGEDGFIQHYDLRSYSATRLF
HCSSFTKNSKHHQNSISLNAIVIDPRHPVYFAVGGSDEYAHVYDIRKCKWDASCSSDVPV
NTFCPRHLIGNNNIHITGLAYSSTSELLISYNDELIYMFENNMGLGSSPSSIPREDIQKV
EEPPVYMGHRNSKTVKGVNFFGPNDEYVMSGSDCGHIFIWKKKGGKLIRLMFGDRHIVNQ
LEPHPHLPMFATCGIEKSVKLWAPMASKVPPLPDNAEKIMESNRQGREDHSRINLTPDVI
MHVLRLQRRQTLAYIERRYSRADLESDDEEEGEAYVLGFSDSDASSEGGGNSRECTIS
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgaagacgagttttaagggaactagagatggatttaccgagatttaccggagagagatg
ggcttgtctcggcccagagacgtaactcgctggttcgctgcttcagaggagctggtgaag
caaatcaatcttaatggaaagttaaatggtcatgagggttgtgtgaatgcagtagaattc
aactctaccggtgaccatcttgtgtcaggttctgatgacaaaaatgttatattttggact
tggaaaaccggaagaaaattattctcatatccttctggacactttgataacatatttcaa
acacgaattatgcctttcactgatgattgtaaaatagtaacttctgctgctgatggccag
gtgaggtttggacaagtttcagaggatggccaagttgatacaaagaggttggggaggcac
caagggcgtgtgtacaagcttgctgtggagccaggaagtccctacatcttatatagctgt
ggtgaagatggtttcatccaacattatgatctgcgaagttatagtgctacaaggcttttc
cattgctcgtcattcacaaaaaacagcaagcatcaccaaaatagcataagtttgaatgct
attgtaattgacccgagacatcctgtttactttgctgtaggaggttctgatgaatatgca
catgtttatgacataagaaaatgtaaatgggatgcatcatgtagttcagatgtacctgtg
aacacgttttgtccccgtcatctgattgggaataataatattcacatcactgggttggct
tattcaagcacaagtgaactgcttatttcctacaatgatgaactcatttatatgtttgag
aataacatgggactgggttcctcaccatcatctatacctcgtgaagacatacagaaagtt
gaagagccacctgtttacatgggccatagaaattcaaagacagttaaaggagtgaatttc
tttggccccaatgatgaatatgtcatgagtgggtctgactgtggccatatatttatttgg
aagaagaagggtggtaaattgatacgattaatgtttggtgaccggcatattgtaaatcag
cttgagccccatccccatttgcctatgtttgctacttgtggaatagaaaaaagtgtgaag
ctctgggctcctatggcaagcaaagttcctccattgcctgacaatgcagaaaagattatg
gagtctaataggcagggaagagaggaccattcacggataaatcttactcctgatgttata
atgcatgttttgaggctgcagaggcggcaaacactggcatatattgaaaggagatacagt
cgagctgatcttgagagtgatgatgaagaagaaggggaggcttatgttttaggattttca
gatagcgatgcctcttctgaggggggtggaaactccagagagtgcaccatcagctag
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