Mangifera indica (mango): 123209642
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Entry
123209642 CDS
T07684
Name
(RefSeq) DNA-directed RNA polymerase III subunit 1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
minc
Mangifera indica (mango)
Pathway
minc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
123209642
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
minc03021
]
123209642
Enzymes [BR:
minc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
123209642
Transcription machinery [BR:
minc03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
123209642
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
123209642
NCBI-ProteinID:
XP_044483703
LinkDB
All DBs
Position
2:18136114..18152614
Genome browser
AA seq
1407 aa
AA seq
DB search
MLQPQQSSPNLVFTKQPYIEDVGPRKIKSIQFSMMSESEIMKAAEVQVYLGQYYNSNRVP
IQGGLLDPRMGPANKSCSCATCHGGFGDCPGHFGYLNLAHPVYNVGYLSTILDILKCICK
SCSRILLEEKLCKEYLKKMRSPKMEALRKSDLMKSMVKKCSTMASKAVRCPRCGYVNGMV
KKAVGVLGIIHDLSKVNENEKECRSAISHTKESKASINAATYNLNPVKVLYLFKRMTDED
CELLYLSDRPEKLIVTNIAVPPIAIRPSVIMDGSQSNENDITERLKRIIQANASLRQDLV
KPSSAFECLLAWDNLQVEVGQYINSDVRVPPFTMQLSKPLSGFVQRLKGKQGRFRGNLSG
KRVEYTGRTVISPDPNLKITEVGIPIRMARILTYPERVSHYNLEKLRQCVRNGPDKYPGA
RMVRYPDGTARVLYGKFRFRIADELKYGCIVDRHLEDGDVVLFNRQPSLHRMSIMCHRAR
IMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILV
ASTQDFLTSSFLITRKDTFYDRATFSLMCCYLGDGMDLVDLPTPAILKPIELWTGKQVFS
VLLRPHATMRVYLNLAVKEKTYSNKLIRTEGDDEIRIDSMCPNDGFVYFRNSELISGQVG
KATLGNGNKDGLYSVLLRDYGAHAAAVCMNRLAKLSARWIGNHGFSIGIDDVQPKEELID
KKKRLLSENYDVCNVKIKEFNEGKLQLKPGCDAAQTLEAVITDLLNRIREDAGKACMGGL
PWRNSPLIMSQCGSKGSPINISQMVALVGQQSVGGRRAPNGFIDRSLPHFPRKSKAPAAK
GFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYDNSVR
NASGCIVQFLYGDDGMDPANMEGKSGDPLNFGRLLMKVEATCPVGENKYLSPEEISEMVR
KRLAECGVNSDKDCSEAFIDSLRKFFQGHRDKLEKKMKFIEDLSGDTNSEVLEKVVHKTS
GITARQLEVFMETCFSRYRLKKIEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNIT
QGVPRIKEIINGAKRISTPIITAELECDYNENSARVVKSRIEKTVLGQVAKSIKIVMTSR
LASIIITLDMQTIQDAHLCITADVVKESILQTPRIKLKEQHIKVLDFRKLEIFPPAEKSK
IHFELHSLKKVLPMIMIKGIKAVERVVIAEKEKEKKKFKENEDEKKKFRLLVEGTGLQAV
MGTEGIDGRKTKSNHIIEVQQILGIEAARTCIIDEINVTMKHHGMSIDIRHMMLLADLMT
FRGEVLGITRFGIQKMDKSVLMLASFEKTADHLFNASVNGRDDRIEGVSECIIMGIPMQI
GTGILKVRQRDIVPPLLRYKAADPILS
NT seq
4224 nt
NT seq
+upstream
nt +downstream
nt
atgctgcaaccgcagcagagttcgccgaacctagtgtttaccaagcagccctacattgaa
gatgttggaccacgcaaaataaagagcattcagttttcaatgatgtcggagtcggagatc
atgaaagctgctgaagtacaagtgtacttaggccaatactacaactccaatagagtgcct
attcaaggcggcttattggatcctcgcatgggacctgcaaataaaagttgttcatgtgcg
acatgccatggaggttttggtgattgtccagggcactttggatacctgaatcttgctcac
cctgtgtataatgttggatatttgagcacaatcttggacatattaaagtgtatttgtaag
tcttgttctcgcatacttctggaggagaaattatgtaaagaatatttgaaaaagatgagg
agtccaaagatggaggctctgcggaagagtgatttaatgaagagtatggtaaaaaagtgt
agtaccatggcaagtaaagctgtgagatgcccaagatgtggatatgtaaatggcatggtg
aagaaggctgtgggtgtgctgggaattattcatgatctgtcaaaagtgaatgagaatgag
aaagaatgcagatctgcaatttctcacacaaaagagtccaaggcatccattaatgcagct
acttataatctaaatcctgtcaaagtgctttatctttttaaaagaatgacagatgaggat
tgtgaattgctttatctttctgatagacctgaaaaacttattgtaaccaacattgctgtc
ccaccaatagctattcgcccgtctgttattatggatggttcgcagagtaatgaaaatgac
attacagagaggttgaaacgtattattcaagcaaatgcaagtcttcgacaggatttagtc
aaaccaagttctgcctttgaatgcttgcttgcttgggataatcttcaagttgaggttggc
cagtatataaacagtgatgttcgtgttcctccgtttaccatgcaattatccaagccatta
agtggttttgttcagcgtctcaaagggaagcagggacgctttcgtgggaatctatctggc
aagcgtgttgagtatactggcaggactgtcatatcacctgaccctaatctaaaaattact
gaggtaggaattcccatccgaatggcacggattttaacttatcctgaacgtgtttcacat
tacaatttagagaaattgaggcaatgcgtccgtaatggccctgataaataccctggggca
aggatggtcagatatcctgatggcacagcaagggtcctgtatggtaaatttagatttcgc
atagctgatgaattgaaatacggctgtatagttgatcgacatttggaagatggggatgtt
gttcttttcaacagacaacctagcttgcatcggatgtctatcatgtgtcatagggcaaga
ataatgccttggagaacattgagattcaatgaatctgtttgcaacccatataatgctgat
tttgatggtgatgaaatgaatatgcacgtgccacaaacagaagaggctcgaacagaggct
cttatgttgatgggggtgcaaaacaatttatgcacaccaaaaaatggggagattttggtt
gcttctactcaagactttttgacttcttcttttctcattacaaggaaggacacattctat
gaccgcgcaactttttcgcttatgtgttgttatctaggagatggcatggacctcgttgat
ttaccaacacctgcaattcttaagccaattgagctctggactgggaaacaagtatttagt
gttctcttgcgtccacatgctactatgagggtctatcttaatcttgcagtcaaggagaaa
acctactccaacaagttaattcgaactgaaggggatgacgaaattcgaatagattcaatg
tgccctaatgatgggtttgtttattttcggaatagtgagctcatttctgggcaagtgggt
aaggcaactttaggaaatggcaataaagatggactttactctgttcttcttagagattat
ggtgcacatgctgctgcagtttgcatgaatcgactggctaaattgagtgctcgatggatt
ggaaatcatggcttctcaattgggattgatgatgtccaaccgaaagaagaattgattgat
aaaaaaaagagattactatcagaaaattatgatgtttgtaatgtaaaaataaaagagttc
aacgaaggaaagctacaacttaaacctggttgtgatgccgctcaaacactagaagctgtg
ataacagatttattaaataggattagagaagatgctgggaaggcatgcatgggaggactg
ccttggagaaacagtccattgatcatgtcacaatgtggttccaaaggatctcctattaat
attagccaaatggttgcattagtcggtcaacaatcagttgggggtcgtcgagctcctaat
ggattcatagatcgaagccttcctcatttccctagaaaatcaaaagcccctgctgctaaa
ggctttgttgctaattcattctatagtgggttgacagctactgagtttttcttccataca
atgggtgggcgagaaggtcttgtagatacggcggtgaaaactgctgatactgggtatatg
tctcgtcgattgattaaagcattggaggacttatccattcattatgataactctgtacgg
aatgcaagtggatgtatagttcaatttctttatggggatgacggtatggatcctgcaaat
atggaaggaaaaagtggggatcccttgaattttggtagattgttgatgaaagtagaggct
acctgtcctgtgggtgaaaataagtacctatctcccgaagaaatctctgagatggtaaga
aagcggcttgcagaatgtggagtgaactctgacaaggattgctctgaagcctttatagat
tctctgagaaaattctttcaaggtcaccgtgataaattagagaaaaagatgaaatttatc
gaagatctttctggggatacaaattctgaggttttagaaaaagttgtccataaaacatct
ggtatcaccgcaaggcagcttgaggttttcatggaaacctgcttctctcgttatcgtttg
aaaaaaattgaagctggaactgcaattggagcaattggagctcaaagtattggtgagcca
ggaacacagatgacattgaaaacctttcactttgctggagtcgctagcatgaatattaca
caaggagttcctcgtatcaaagaaataataaatggagctaaaaggattagcactcctatt
attacagcagaacttgagtgtgattataatgagaattctgcacgagtggtgaaaagccgg
attgagaaaactgttttagggcaggtagctaagagtatcaagattgtaatgacttcaagg
ttagcatcaataatcatcacgcttgatatgcaaacaattcaagatgcacatctatgtata
actgctgatgtcgtgaaagaatcaattttacaaactccaagaatcaaactgaaggaacag
catatcaaggttttggattttagaaaattggaaatttttcctccggctgagaaaagtaaa
attcatttcgaactccattctctgaaaaaggtgcttccaatgattatgataaagggcata
aaagccgttgaacgtgttgttattgctgagaaagaaaaggagaaaaagaaattcaaagag
aatgaagacgagaagaaaaagttccggttgttggtagaaggcactggcctccaagcagtc
atgggcactgaaggaattgatggacgaaaaacaaagagtaatcacattattgaagtacaa
cagattcttggaattgaagctgcaagaacatgcataatagatgagataaatgtaacgatg
aagcatcatgggatgagcatagacatacggcatatgatgcttttagcagatctgatgaca
tttaggggagaagttcttggaatcacaagatttggaattcaaaaaatggacaaaagtgta
ttgatgttggcttcatttgaaaagacagcagatcaccttttcaatgcttctgtaaatggg
agggatgataggattgagggagtaagtgaatgcatcattatgggaatccctatgcagata
ggaactgggatactcaaagttagacaaagagatattgtgcctccattgctgagatacaag
gcagcagatccaattttatcttga
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integrated database retrieval system
