Mangifera indica (mango): 123209783
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Entry
123209783 CDS
T07684
Name
(RefSeq) E3 ubiquitin-protein ligase SIRP1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
minc
Mangifera indica (mango)
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
minc04131
]
123209783
04121 Ubiquitin system [BR:
minc04121
]
123209783
Enzymes [BR:
minc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123209783
Membrane trafficking [BR:
minc04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
123209783
Ubiquitin system [BR:
minc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
123209783
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-ANAPC11
zf-RING_UBOX
zf-C3HC4_3
zf-HC5HC2H
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
123209783
NCBI-ProteinID:
XP_044483859
LinkDB
All DBs
Position
2:22188790..22190254
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AA seq
333 aa
AA seq
DB search
MGDVTESAYWCYMCTQMVNPRMESEIRCPLCEGGFVEAMNSSVEGRHPINNETSVGSDRA
LSLWAPILLRIMGSVGSSFGSGSGFGPSRPRITGNDSQNEAAEQEREFESLFRRPRRSTS
ASFLRMLQDIRSGMASQTNDSENHRERNGNLILVNPMNQEALIIQGQNAATSLGDFLIGP
GLDLLLQHLLENAPNRYGTLPTDKETIKALPTVAVDEDLQCAVCLEDFDIGSEAKEMPCK
HKFHGDCILPWLELHSTCPVCRFQMLSVELEIEGNRAANREQRVGNGRRHWIPIPLPSDG
LFSLSGSRNGGSSTSAPSTPPPFPGTASHTDEN
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgggggatgtcacggagagtgcatactggtgttacatgtgcactcaaatggtgaatcca
agaatggaatctgagataagatgtccactttgtgagggcggttttgtggaagcaatgaac
agcagcgtggaaggccgccaccccatcaacaatgaaacgtctgttgggtcagatcgtgct
ctatctttatgggctccaatcttacttcgtataatgggcagtgttggttctagttttggt
tctggttctggttttggtccttctcgtccacgtatcactggcaacgattcacaaaacgag
gcggctgagcaagagagggagtttgagtccttgtttaggaggccaagaagaagcacctcg
gcttcattcttgcgtatgcttcaagatatccgttctggtatggcttcacaaacaaatgat
tctgaaaaccatagggagaggaatggtaatttgattttggttaatcctatgaatcaagag
gctcttattatacaaggtcagaatgcagccacatctttaggtgactttcttataggacct
ggtctggatttgttgcttcaacatttgctggagaatgctcctaacagatatggaaccctg
ccgactgataaagaaaccattaaggcattgccaacagttgcagttgatgaggatttacaa
tgtgcagtgtgcttagaggattttgatattggaagtgaagcaaaggagatgccatgtaaa
cataagttccatggtgattgtattcttccatggctggaacttcatagcacttgcccagtt
tgcaggttccaaatgctatctgttgaacttgaaattgaaggaaacagggctgcaaatcga
gaacaaagagtgggaaatgggaggaggcattggattccaattccgttgccttcagatggc
ttgttttctttgtcaggatctcggaatggtggaagttctacttcagcaccatcgacaccg
ccaccattccctggaactgcttctcatacagacgagaattga
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