Mangifera indica (mango): 123210131
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Entry
123210131 CDS
T07684
Name
(RefSeq) sister chromatid cohesion protein SCC4 isoform X1
KO
K11266
MAternally affected uncoordination
Organism
minc
Mangifera indica (mango)
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
minc03036
]
123210131
Chromosome and associated proteins [BR:
minc03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
123210131
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cohesin_load
TPR_2
TPR_12
ARM_TT21_N
TPR_MalT
NPV_P10
Motif
Other DBs
NCBI-GeneID:
123210131
NCBI-ProteinID:
XP_044484286
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All DBs
Position
3:4979571..4985242
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AA seq
723 aa
AA seq
DB search
MEAVAEGLWGLADYHENQSEIGKAVKCLEAICQSHVSFLPIIEVKTRLRIATLLLKHTHN
VNHAKSHLERSQLLLKSIPSCFELKCRTFSMLSQCYHLVGAIAPQKHILFKALDLTSSAP
HELAVKLWCCNFNSQLANALIIEGDFQTSMSALQSGFVCATEISYPDLQMFFATSILHVH
LMQWDDDISVQRAMKKCDEVWESIDPNRREQCLGLLFYNELLHIFYRLRICDYKNASQHV
DKLDAAMKADMQKMQAVEQLVGELDALNQSLSRPDLPLRERLALSGRQAQLQMHLRSITE
SSFVTGKDTLEPAYFGNARQAPGDKLTLAPAPINGEWLPKSAVYALVDLMVVILGRPKGN
FKECAKRIQSGIHTIQDALVKLGINDGVREVDLQHSTIWMAGVYLMLLMQFLENKVAVEL
TRSEFIEAQEALMQMKNWFIRFPTILQACESIIEMLRGQYAHSVGCYSEAAFHYVEAAKL
TESKSMQAMCHAYAAVSYFCIGDAESSSQAIDLIGPDYQMKDSFLGVREEASHHFAYGLL
LMRQQNFQEARNRLAKGLQIAHNHMGNLQLVSQYLTILGSLALALHDTVQAREILRSSLT
LAKKLSDIPTQIWVLSVLTALYQQLGERGNEIENDEYRMKKLDDLQKRLADAYSSIHHIE
LTDKVKLEVQQFNELDTKRAMEGQSMRVNLDIPESVGLSTPLPMHSSSKLVDLDTGKRGK
RKI
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggaggcagtggcggaagggctatggggtctggccgattaccatgaaaaccaatcagaa
attggaaaggcggtgaaatgccttgaagctatttgtcaaagccatgtttcgttcttaccc
ataattgaggtgaagacccgtcttcgtatagccactcttcttcttaaacacacccacaac
gtcaatcacgcaaaatcccatcttgaacgttcccaattgcttctcaaatcaatcccatct
tgctttgaattgaagtgtagaacgttcagtatgctgagtcagtgttatcatcttgttggc
gccatcgctcctcaaaagcacattttgttcaaggctcttgaccttacttcttctgctcca
catgagcttgcagtaaagttgtggtgttgtaatttcaattcccagcttgcaaatgctttg
attattgaaggagactttcagacttctatgtctgcattacaatctgggtttgtttgtgct
actgaaatttcgtatcccgatttacagatgttttttgctacttcaattttacacgtgcac
cttatgcaatgggatgatgatatttctgttcagagagctatgaaaaagtgtgatgaggtt
tgggaatctattgatccaaataggagagaacaatgtcttggtttgctcttttacaatgag
ctgctgcacatcttctaccggcttcgaatctgtgattacaagaatgcttcacagcacgtc
gacaaattggatgcagctatgaaggctgacatgcagaaaatgcaagcagtcgagcagctg
gtgggtgaacttgatgccttgaatcaaagtctttcacgccctgacttaccattgagggaa
aggttagctctttctggaaggcaagcacagcttcaaatgcatctcagaagtattacggaa
tcaagctttgtaactggcaaagacactcttgaacctgcatattttggaaatgcaagacag
gcaccgggagataagctcacgcttgcaccagctccaattaatggggaatggcttccaaaa
agtgctgtttatgcattggttgaccttatggtagtcatacttgggcgtccaaaaggaaat
tttaaggaatgtgctaagcggattcaatctggaattcatactatccaagatgccctagtg
aaacttggaataaatgatggcgtaagagaagtggatttgcaacactcaaccatctggatg
gctggtgtgtatttaatgctactaatgcagttccttgaaaacaaagtggctgtggaactt
actcggtctgaatttattgaagcacaggaggcactgatgcaaatgaagaattggttcatt
aggtttccaaccattttacaggcttgtgagagcatcattgagatgctcaggggacaatat
gctcattctgttggttgttatagtgaagcagcttttcattatgttgaagcagcaaagcta
acagagagcaaatcgatgcaagctatgtgtcacgcttatgcagctgtctcttacttctgc
attggtgatgctgaatcatcttcacaggcaattgatttgataggacccgattaccaaatg
aaggattcttttttaggagttcgagaagaagcaagtcatcattttgcttatggcctttta
ttgatgaggcaacaaaatttccaagaagcaagaaatcgcctagccaaaggtttgcagatt
gctcataatcatatggggaaccttcaacttgtttctcagtatttgacaatccttgggagt
ttggcactcgcactgcatgacacggtacaagccagagagatcttgagatcctctcttaca
ttggcaaagaagctttctgatattccaactcagatctgggtgctatctgttttgacagct
ttgtatcagcagttgggtgagagagggaatgaaatagagaatgatgaataccgaatgaag
aagttagatgatctgcaaaagagacttgctgatgcatattcatccattcatcacattgaa
ttgactgacaaagtaaaacttgaagttcagcaatttaatgaacttgacactaagcgtgca
atggaaggccaatccatgagagtcaatcttgatattccagagtctgttggtctatcaaca
ccactaccaatgcattcatcatcaaagctagttgatttggacactgggaaacgtgggaag
agaaaaatctaa
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