Mangifera indica (mango): 123210368
Help
Entry
123210368 CDS
T07684
Name
(RefSeq) ubiquitin receptor RAD23b-like
KO
K10839
UV excision repair protein RAD23
Organism
minc
Mangifera indica (mango)
Pathway
minc03420
Nucleotide excision repair
minc04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
123210368
09124 Replication and repair
03420 Nucleotide excision repair
123210368
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
minc03051
]
123210368
03400 DNA repair and recombination proteins [BR:
minc03400
]
123210368
Proteasome [BR:
minc03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
123210368
DNA repair and recombination proteins [BR:
minc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
123210368
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
Rad60-SLD
CUE
TECR_N
UBA_3
Rad60-SLD_2
Dsc3_N
Ubiquitin_4
DUF515
Motif
Other DBs
NCBI-GeneID:
123210368
NCBI-ProteinID:
XP_044484617
LinkDB
All DBs
Position
3:6003549..6012233
Genome browser
AA seq
373 aa
AA seq
DB search
MKLTVKTLKGSHFEIKVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA
DNKVSEDGFLVVMLSKSKTLGSAGASSAQSASTTPSTTAPSSNSSPALETSAQAPIPKIA
TSASDATTTNANTDTYGQAASTLVAGNDLEQTIQEIMEMGGGTWDKETVTRALQAAYNNP
ERAVDYLYSGIPEMAEVAVPVARFPESQATETGAAGAPPVSGAPNSSPLNMFPQEAISGA
AAAGLGSLDFLRNNQQFQALRSMVQSNPQILQPMLQELGKQNPQLLRSIQEHQVEFLQLI
NEPIDGSEGDIFDQPDQEMPHAINVTPAEQEAIDRLEAMGFDRALVIEAFLACDRNEELA
ANYLLENGGDFED
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcactgtaaagactctcaagggcagccattttgagattaaggttcagccttcc
gatacggttatggctgtgaagaagaacatagaagatgtacaaggcaaagacaattatcct
tgtgggcaacagttgttaattcacaatggtaaagtgttgaaagacgagacaactttagct
gataacaaagtctctgaagatggctttcttgttgttatgcttagcaagagtaaaacgtta
ggctcagctggggcttcatctgctcagtctgcttccaccactccatcaacaactgcacca
agctccaattctagtcctgcactggaaacctctgcacaggcaccgattccaaagattgcc
acatctgcttctgatgcaacaacgactaatgcaaacactgatacctatggtcaagctgct
tcaacattagttgctggaaatgatcttgagcagacaattcaagaaataatggaaatgggt
ggtggaacctgggacaaagaaactgttactcgtgcacttcaagcagcttataataaccca
gagcgagcagtggattacttatactctggtattcctgaaatggctgaagttgctgtgcca
gtggctcggtttccagaaagtcaggcaactgaaactggtgcagcaggagctccaccggtc
tctggagcacctaattcctctcccttaaatatgtttccacaggaggcaatttcaggtgct
gctgctgctggacttggatctttggactttcttagaaacaatcaacagtttcaagctttg
cgttcaatggtgcaatcaaatccacagattttacagcctatgcttcaagagcttggaaag
caaaacccacagcttttacgatcaattcaagaacaccaagtagagttccttcagttgata
aatgaacctattgatggctctgaaggggatatatttgatcagcctgatcaagaaatgcct
catgcaatcaatgtcacccctgctgagcaggaggctatcgatcgactggaagcaatgggg
tttgatagagctttagttattgaggcatttttggcatgtgatcgtaatgaagaattggcg
gccaactacttactagaaaatggtggagattttgaggattga
DBGET
integrated database retrieval system