KEGG   Mangifera indica (mango): 123210414
Entry
123210414         CDS       T07684                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7-like
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
minc  Mangifera indica (mango)
Pathway
minc03020  RNA polymerase
minc03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:minc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    123210414
  09124 Replication and repair
   03420 Nucleotide excision repair
    123210414
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:minc03021]
    123210414
   03019 Messenger RNA biogenesis [BR:minc03019]
    123210414
   03400 DNA repair and recombination proteins [BR:minc03400]
    123210414
Transcription machinery [BR:minc03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     123210414
Messenger RNA biogenesis [BR:minc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     123210414
DNA repair and recombination proteins [BR:minc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      123210414
SSDB
Motif
Pfam: SHS2_Rpb7-N S1
Other DBs
NCBI-GeneID: 123210414
NCBI-ProteinID: XP_044484691
LinkDB
Position
3:complement(5980220..5982655)
AA seq 176 aa
MFFHIVLERNMQLHPRHFGRNVREHLVSKLMKDVEGTCSGRHGFVVAITGVDSIGKGLIR
DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
SGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPTTL
NT seq 531 nt   +upstreamnt  +downstreamnt
atgttcttccacatagtattagagcgaaacatgcaactgcatccgcgtcactttggccgc
aacgttcgcgagcacctcgtctccaaactcatgaaagatgtagagggcacgtgtagtggt
cgacatggatttgtggtggctataacgggtgtagacagcattgggaaagggctcattcga
gatgggactggatttgtgacgtttccagtgaagtatcagtgtgttgtgttcagacccttc
aaaggggaaatattagaagctgttgtgactatggtcaacaagatgggatttttcgccgaa
gctggacctgttcaaatttttgtttcaaatcatttgatacctgatgatatggagttccag
tctggagatatgccgaattatacaacctctgatggatcagtcaaaattcaaaaggacagt
gaagtgcggttaaagataattgggactagagtagatgctactgaaattttctgcattggc
accataaaggacgatttcttgggagtgattaatgatcctacaacactttag

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