KEGG   Mangifera indica (mango): 123210526
Entry
123210526         CDS       T07684                                 
Name
(RefSeq) sm-like protein LSM1B
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
minc  Mangifera indica (mango)
Pathway
minc03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:minc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    123210526
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:minc03019]
    123210526
Messenger RNA biogenesis [BR:minc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     123210526
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     123210526
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 123210526
NCBI-ProteinID: XP_044484862
LinkDB
Position
3:8649460..8651949
AA seq 128 aa
MSWAGPDDFYLSTSLASYLDKKLLVLLRDGRKLIGTLCSFDQFANAVLESACERVIVGDL
YCDIPLGLYVIRGENVVLIGELDLEREELPPHMTRVSVAEIRRAQKAEREATDLKGTMRK
RMEFLDLD
NT seq 387 nt   +upstreamnt  +downstreamnt
atgtcttgggcaggcccagatgatttttatctctctacttctcttgccagttacttagat
aagaaactacttgtattgcttcgtgatggtcggaaacttatcggtacactttgttcattt
gatcaatttgccaatgctgttcttgagagtgcatgtgagagagttattgttggtgacctt
tattgtgacatcccactaggtctatatgtaattcgtggggagaatgttgttttaattggt
gagctggacttggagagggaggagcttcctccacacatgactcgtgtttcagttgcagaa
attagaagggcacagaaagcagagagggaggcaacagatctcaaaggtacaatgaggaaa
agaatggagttcttggatttggactag

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