Mangifera indica (mango): 123210801
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Entry
123210801 CDS
T07684
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
minc
Mangifera indica (mango)
Pathway
minc04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
123210801
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
minc03019
]
123210801
03009 Ribosome biogenesis [BR:
minc03009
]
123210801
04131 Membrane trafficking [BR:
minc04131
]
123210801
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
minc04147
]
123210801
Messenger RNA biogenesis [BR:
minc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
123210801
Ribosome biogenesis [BR:
minc03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
123210801
Membrane trafficking [BR:
minc04131
]
SNARE
SNARE associated proteins
Others
123210801
Autophagy
Aggrephagy
Other aggrephagy associated proteins
123210801
Exosome [BR:
minc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
123210801
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_33
AAA_2
AAA_5
AAA_22
AAA_14
NPHP3_N
TIP49
AAA_17
RNA_helicase
nSTAND3
Mg_chelatase
AAA_28
ATPase_2
AAA_18
Parvo_NS1
IstB_IS21
ABC_tran
Viral_helicase1
AAA_7
NACHT
NB-ARC
TsaE
Vps4_C
DUF815
ResIII
AAA_24
Zeta_toxin
AAA_lid_PRS2_C
KAP_NTPase
Zot
Motif
Other DBs
NCBI-GeneID:
123210801
NCBI-ProteinID:
XP_044485219
LinkDB
All DBs
Position
3:2892129..2896396
Genome browser
AA seq
810 aa
AA seq
DB search
MADLSAQPSSSNPKSDKKDFSTAILERKKSPNRLVVDEAVNDDNSVISMHPTTMEKLQFF
RGDTVLIKGKKRKDTVCIVLADEQCEEPKVRMNKVVRSNLRVRLGDVVSVHQCPDVKYGR
RVHILPIDDSIEGVTGNLFDAYLKPYFLESYRPVRKGDLFLVRGGMRSVEFKVIETDPGE
YCVVAPDTEIFCEGEPIKREDEERLNEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSI
GVKPPKGILLYGPPGSGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA
EKNAPSIIFIDELDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSI
DPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEDVDLERVARDTHGYVGADLAA
LCTEAALQCIREKMDVIDLEDETIDAEVLNSMAVTNEHFLTALGISNPSALRETVVEVPN
VSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN
ECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDA
GGAADRVLNQLLTEMDGMTAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEASR
LQIFKACLRKSPVSHDVDLVALSRYTHGFSGADITEICQRACKYAIRENIEKDIERERRK
SENPQAMEEDDIDDVPEIKAAHFEESMKFARRSVSDADIRKYQLFAQTLQQSRGIGTEFR
FPDRTENAATGASDPFSSATGAADDDDLYN
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atggctgatcttagtgcccaaccatcttcttcgaacccgaaaagtgataagaaggatttt
tccacggcaatcctggagcgtaagaagtctcccaaccgtcttgttgttgatgaagctgtt
aacgatgacaattctgtgatttccatgcaccctacgaccatggaaaagctgcaatttttt
cgaggagacactgttttgattaaggggaagaagcgaaaagacactgtttgcattgttctt
gctgatgaacaatgtgaagaaccaaaagtgagaatgaacaaagtcgtacgctctaatctt
agagttcgccttggagatgtcgtatctgttcatcaatgcccggatgtgaaatatggtagg
cgggttcacatccttcccattgatgattcaattgagggtgtaactggcaacttatttgat
gcatatttaaaaccatacttcttggaatcttaccggcctgtgagaaaaggtgaccttttc
ctagtcaggggtggaatgcgtagtgttgagtttaaagtaattgagacagaccctggggag
tactgtgttgttgcaccagatactgagatcttctgtgaaggggaacccatcaaacgtgag
gatgaggagaggttaaatgaggtaggctatgatgatgttggtggtgttaggaagcaaatg
gctcaaattcgtgagcttgtagaacttcctctcagacaccctcagctcttcaaatcaatt
ggtgtgaaacccccaaaggggatcttgctttatgggccacctgggtctggaaaaaccctg
attgctagagctgttgctaatgagacaggtgcattcttctttttgattaatggacctgaa
attatgtcaaagttggctggtgagagtgaaagcaacttgaggaaggcatttgaggaagct
gaaaagaatgccccatcgatcatatttattgatgaattagattccatagctccaaagagg
gaaaagacacatggtgaagtggagaggcgtatagtttcccagcttctaactctaatggat
ggccttaagtcccgggcccatgtgattgtcatgggagccacaaataggccaaatagcatt
gatcctgctttgaggagatttggaagatttgatcgggagattgacataggtgttccagat
gaagttggaaggttggaagttctccgaattcacacaaaaaatatgaaactggctgaagat
gttgatcttgaaagagttgcaagggatacccatggttatgttggggcagatcttgctgct
ctctgtacagaagctgcccttcagtgtatccgagagaaaatggatgtcattgacttagag
gatgagacaattgatgctgaggtattgaattcaatggctgtaaccaatgaacacttccta
actgcattggggatctcaaacccatcagccttgcgtgaaactgttgtggaggttcctaat
gtctcatgggaggatattggtgggttggaaaatgtcaagagagagcttcaagagactgta
caatacccagtggagcatcctgagaaattcgagaaatttggcatgtcaccttctaagggt
gttctcttctatggacctcctggctgtggtaaaacccttcttgcaaaagctattgccaat
gagtgtcaggctaacttcataagtgtcaaaggacctgagttgctaacaatgtggtttgga
gaaagtgaggcaaatgtacgggagatttttgacaaagcacgacagtcagcaccttgtgtg
ctattcttcgatgaactcgattctattgctacacagcgtggaagttctgttggagatgct
ggtggtgccgctgatagagtcttgaatcaactactgactgaaatggatgggatgacagca
aaaaaaacagtttttatcataggtgctaccaaccgcccagacattattgacccagcattg
ctcaggcctggacgtttggaccaattaatttatattcctctgccagatgaggcttcccgt
cttcagatatttaaagcgtgtttgcggaagtcacctgtctctcatgatgttgacttagta
gctttatcacgttatacccatggttttagtggtgcagatattactgaaatatgtcaacgt
gcctgcaaatatgctataagagaaaatattgagaaggatattgagagggagaggaggaag
agcgagaatcctcaggccatggaagaagatgatattgatgatgtacctgagataaaagcg
gcacactttgaggagtcaatgaagtttgcacgccggagtgtcagtgatgcagacatccgc
aagtaccagctctttgcacagactttacagcaatctcgtggaattggaactgagttccgg
tttccagatcggactgagaatgctgccacaggtgcttcagacccattctcctcagcaact
ggtgctgcagatgatgatgatctgtataactga
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