Mangifera indica (mango): 123211712
Help
Entry
123211712 CDS
T07684
Name
(RefSeq) protein RAE1 isoform X1
KO
K14298
mRNA export factor
Organism
minc
Mangifera indica (mango)
Pathway
minc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123211712
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
minc03019
]
123211712
03036 Chromosome and associated proteins [BR:
minc03036
]
123211712
Messenger RNA biogenesis [BR:
minc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
123211712
Chromosome and associated proteins [BR:
minc03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
123211712
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR3_1st
WD40
Beta-prop_WDR5
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR3_2nd
Beta-prop_RIG_2nd
WD40_Gbeta
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
EIF3I
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_ACSF4
Beta-prop_HPS5
Beta-prop_Aladin
Beta-prop_SPT8
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
WD40_RFWD3
Beta-prop_WDR41
Beta-prop_RSE1_2nd
Beta-prop_Nup120_160
Vitelline_membr
Beta-prop_BBS7
Motif
Other DBs
NCBI-GeneID:
123211712
NCBI-ProteinID:
XP_044486491
LinkDB
All DBs
Position
3:6336001..6342049
Genome browser
AA seq
350 aa
AA seq
DB search
MATFGAAAAAINQNPNKSFEVAQPPSDSVSSLSFSPKANFLVATSWDNQVRCWEISRNGA
NVASVPKASISHDQPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKE
VAWVPEMNLLVTGSWDKTLKYWDTRQSNPVHTQQLPDRCYALTVRHPLMVVGTADRNLIV
FNLQNPQTEFKRIPSPLKYQTRCVAAFPDQQGFLVGSIEGRVGVHHLDDSQQSKNFTFKC
HRDGNDIYSVNSLNFHPIHHTFATAGSDGAFNFWDKDSKQRLKAMSRCGQPIPCSTFNND
GSIFAYSVCYDWSKGAENHNPATAKTYIYLHLPQENEVKGKPRVGTSGRK
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggctactttcggtgctgccgctgctgcaataaatcaaaaccctaacaaatccttcgag
gttgcccaacctccaagtgattctgtttcaagccttagtttcagtcccaaggccaatttc
ttggttgcaacttcatgggataatcaggtacgttgttgggaaatttcacgcaatggagct
aatgtggctagtgttcccaaggcatcaatttcacatgaccaaccggtattgtgctcaaca
tggaaggatgatgggactactgtattttctggaggatgtgacaagcaggtgaagatgtgg
cctctgctgtcgggtggtcagccggtaactgttgctatgcatgatgcaccaattaaagag
gttgcctgggttccagagatgaatctacttgtcactggaagctgggacaaaactttgaag
tactgggatacaaggcagtcaaaccctgtgcatactcaacaactacctgatcgctgttat
gcattaacagtgaggcatcctctgatggttgttggcaccgcagatagaaatctaattgtc
tttaacttgcagaatccacagactgaatttaaaagaattccttcacccctgaagtatcag
acaagatgtgtagctgcctttcctgatcagcaaggttttttggttggttcaatagaggga
agagttggtgtacatcatctggatgattcacagcaaagtaagaatttcacattcaaatgc
cacagagatggcaatgatatatactcggtcaattctttgaacttccatcctatacatcac
acttttgcaacagctgggtctgatggtgctttcaatttctgggacaaggatagtaagcag
aggctcaaggccatgtcaaggtgtgggcagcctataccctgcagtacattcaacaatgat
ggctcaatatttgcctactcggtgtgttatgattggagtaagggtgcagaaaatcacaac
ccggcaacagcgaagacatatatctatctgcacttgccacaggagaatgaggttaaaggc
aagcctcgagtcggaacaagtggcagaaagtga
DBGET
integrated database retrieval system