KEGG   Mangifera indica (mango): 123211712
Entry
123211712         CDS       T07684                                 
Name
(RefSeq) protein RAE1 isoform X1
  KO
K14298  mRNA export factor
Organism
minc  Mangifera indica (mango)
Pathway
minc03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:minc00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    123211712
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:minc03019]
    123211712
   03036 Chromosome and associated proteins [BR:minc03036]
    123211712
Messenger RNA biogenesis [BR:minc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     123211712
Chromosome and associated proteins [BR:minc03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    123211712
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40_Prp19 Beta-prop_WDR3_1st WD40 Beta-prop_WDR5 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz WDR55 Beta-prop_WDR3_2nd Beta-prop_RIG_2nd WD40_Gbeta Beta-prop_WDR36-Utp21_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 EIF3I ANAPC4_WD40 Beta-prop_TEP1_C Beta-prop_ACSF4 Beta-prop_HPS5 Beta-prop_Aladin Beta-prop_SPT8 WD40_MABP1-WDR62_2nd Beta-prop_EIPR1 Beta-prop_IFT122_1st Beta-prop_WDR75_1st Beta-prop_IFT140_1st WD40_RFWD3 Beta-prop_WDR41 Beta-prop_RSE1_2nd Beta-prop_Nup120_160 Vitelline_membr Beta-prop_BBS7
Other DBs
NCBI-GeneID: 123211712
NCBI-ProteinID: XP_044486491
LinkDB
Position
3:6336001..6342049
AA seq 350 aa
MATFGAAAAAINQNPNKSFEVAQPPSDSVSSLSFSPKANFLVATSWDNQVRCWEISRNGA
NVASVPKASISHDQPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKE
VAWVPEMNLLVTGSWDKTLKYWDTRQSNPVHTQQLPDRCYALTVRHPLMVVGTADRNLIV
FNLQNPQTEFKRIPSPLKYQTRCVAAFPDQQGFLVGSIEGRVGVHHLDDSQQSKNFTFKC
HRDGNDIYSVNSLNFHPIHHTFATAGSDGAFNFWDKDSKQRLKAMSRCGQPIPCSTFNND
GSIFAYSVCYDWSKGAENHNPATAKTYIYLHLPQENEVKGKPRVGTSGRK
NT seq 1053 nt   +upstreamnt  +downstreamnt
atggctactttcggtgctgccgctgctgcaataaatcaaaaccctaacaaatccttcgag
gttgcccaacctccaagtgattctgtttcaagccttagtttcagtcccaaggccaatttc
ttggttgcaacttcatgggataatcaggtacgttgttgggaaatttcacgcaatggagct
aatgtggctagtgttcccaaggcatcaatttcacatgaccaaccggtattgtgctcaaca
tggaaggatgatgggactactgtattttctggaggatgtgacaagcaggtgaagatgtgg
cctctgctgtcgggtggtcagccggtaactgttgctatgcatgatgcaccaattaaagag
gttgcctgggttccagagatgaatctacttgtcactggaagctgggacaaaactttgaag
tactgggatacaaggcagtcaaaccctgtgcatactcaacaactacctgatcgctgttat
gcattaacagtgaggcatcctctgatggttgttggcaccgcagatagaaatctaattgtc
tttaacttgcagaatccacagactgaatttaaaagaattccttcacccctgaagtatcag
acaagatgtgtagctgcctttcctgatcagcaaggttttttggttggttcaatagaggga
agagttggtgtacatcatctggatgattcacagcaaagtaagaatttcacattcaaatgc
cacagagatggcaatgatatatactcggtcaattctttgaacttccatcctatacatcac
acttttgcaacagctgggtctgatggtgctttcaatttctgggacaaggatagtaagcag
aggctcaaggccatgtcaaggtgtgggcagcctataccctgcagtacattcaacaatgat
ggctcaatatttgcctactcggtgtgttatgattggagtaagggtgcagaaaatcacaac
ccggcaacagcgaagacatatatctatctgcacttgccacaggagaatgaggttaaaggc
aagcctcgagtcggaacaagtggcagaaagtga

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