Mangifera indica (mango): 123211916
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Entry
123211916 CDS
T07684
Name
(RefSeq) protein SPA1-RELATED 2-like
KO
K16240
protein suppressor of PHYA-105 1 and protein SPA1-related 2
Organism
minc
Mangifera indica (mango)
Pathway
minc04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
123211916
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
minc04121
]
123211916
Ubiquitin system [BR:
minc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Multi subunit type E3 associated proteins
123211916
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_TEP1_C
WDR55
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Pkinase
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_DCAF4
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
WD40_like
PK_Tyr_Ser-Thr
WD40_RFWD3
Beta-prop_IFT122_1st
Beta-prop_SCAP
IRS
YflT
Motif
Other DBs
NCBI-GeneID:
123211916
NCBI-ProteinID:
XP_044486823
LinkDB
All DBs
Position
3:975731..983239
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AA seq
1115 aa
AA seq
DB search
MLYVSYTYMVLEVSKSNKSNLQQWSNIPINEACMNDMDDGPGDEVASVNAAEGAHLQNKE
NECSLKPESCNKLESQEMAIPESNSSDGSFQILADMLEGKNINRIVSPVDASELPCTSLQ
NVNDAGVMVEELTVQKYNSSNLTIVGTSNNKERMQTRHNRWQHLYQLAGGSGSGTPHDDR
ENGQTMLSGWEDVRDTSVHRFLAQKPLNDDHNVVKEPLTNSENNGVLSNMLSHGHIRTKI
LSKSGFSEFFVKTTLKGKGIVCRGPSHDIFKQSRDLKNTEEAFGTTKRSNGSPMAAGTNT
GVSNVLSNAVGDTMLASNASPNLGAKVGVPSSCRPGGSRAGSSDYGVSLREWLKARGHKV
KKVECLYIFRQIVELVDYSHTQGIILLDLRPSSFKLLRSNQVKYLESTSQRETLQSVAHR
RRPAKEEVFPPGVMFSKKQKFNDNTGFVERWPLFSSRSSIKVETANENDINTAITQYSSK
DMKEHHTSTGYGTQSKSSSPFVSNTVQEPTASVCEQLEEKWYASPEELNEGICTISSNIY
SLGVLFFELLGRFDSERAHAAAMSDLRHRILPPTFLSENPKEAGFCLWLFHPEPHSRPTT
GEILQSEVINGFQEVCAEELSLSIEQDASESELLLHFLTSLEEQKQNHASKLVEDIRCLE
ADIAEVDKRLCLKNPLVRSCLQKNSINARENKYIITQPSSSELHLSPVLDANEMRLMRNF
SQLESAYFSMRSKIQLPDTDATTCWDKNLLKNRDNQYLAQKEGVQNPTDPLGSFFDGLCK
YARYSKFEVRGVLRTGDFNNSANVICSLCFDRDEDHFATAGVSKKIKIFEFNALLNDSVD
IHYPAVEMLNRSKLSCICWNNYIKNFLASADYDGVVKIWDASTGQTISHYIEHEKRAWSV
DFSRVHPMKLASGSDDYSVKLWSTNEKNCLATIKNNANVCCVQFSTHSSYLLAFGSADYR
TYCYDIRNTRAPWCVLAGHEKAVSYVKFLDSVTLVTASTDNTLKLWDLQKTSHCGPSTNA
CSLTFSGHTNEKNFVGLSTADGYIACGSETNEVYAYYRSLPMPIASYKFGSIDPISGKET
DDDSGLYVSSVCWRAKSDMVVAASSSGCIKVLQMV
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atgctatacgtgtcttatacatatatggttcttgaagtttctaaatcaaataagtccaat
ttacagcaatggtcaaacataccaattaatgaagcttgtatgaatgatatggatgacgga
ccgggtgatgaagtggcttcagttaatgcagctgaaggtgctcacctccagaataaagag
aatgagtgttcattgaaacctgaaagctgcaacaagttggaatctcaagaaatggccatt
ccagaaagcaattcaagtgatggttcatttcaaatacttgcagatatgttagaaggcaag
aacataaataggattgtaagtcctgtggatgcatcagaactcccatgtactagccttcaa
aatgtcaatgatgcaggtgtcatggttgaagagttaactgtgcaaaaatacaatagttca
aatttaaccattgtgggtacatcaaacaataaagaaagaatgcagaccaggcataacagg
tggcagcatctgtatcagttggcaggtggatcaggaagtgggactccgcacgatgatagg
gaaaatggtcaaactatgttgagtggatgggaagatgtaagagacacgtctgtccacagg
ttcttggctcagaaaccactaaatgatgaccacaatgtagtcaaggaaccattgacaaat
tctgaaaataatggagttctgagcaatatgttatctcatggacacatacggacaaagatt
ttatctaagtcagggttttccgagttttttgtgaaaactactttgaagggcaaggggata
gtatgtcgaggtccatctcatgatatatttaaacagtctagagatctgaaaaatacagag
gaagcttttggtactacaaagcgttctaatgggtcaccaatggctgctggaaccaataca
ggggtttctaatgttttatcaaatgctgttggtgacactatgttggcttctaatgcttca
ccaaacttgggtgccaaagttggtgtgccttcttcctgtaggcctggtggatccagggct
ggtagctctgattatggggtgagtttgagggaatggctgaaagctaggggccataaagtg
aaaaaagttgagtgcttgtatatatttaggcagattgtggagctggtggattattctcac
actcaaggtattatcttgctggacttacggccatcatctttcaagttgttgcgatcaaat
caggttaagtacctcgaatcaactagccaaagagaaactttacagagtgttgcacatagg
agaaggccagcaaaggaagaagtatttccccctggagttatgttttcaaagaagcaaaaa
ttcaacgataacacgggctttgttgaacggtggcctttgttttcttcaagatctagcatc
aaagttgaaacagccaatgagaatgacataaatacagccataacacagtattcttcaaag
gatatgaaggaacatcacacaagtacgggatatggaacacagagcaagtccagcagcccc
tttgtctctaatactgtgcaagagcctacggcttctgtatgtgagcagttggaagaaaaa
tggtatgcaagccctgaggagctcaatgaggggatttgcactatatcttcgaatatctat
agtcttggtgttcttttttttgagttacttggtcgttttgattctgaaagggcacatgct
gctgcaatgtcagatttacgccataggatacttcctcctacttttctatctgaaaatccc
aaggaagctggattttgcctgtggttatttcatcctgaaccccattcacgcccaacaacc
ggggaaatcctacaatctgaagtaattaatggatttcaggaggtgtgtgcagaagaactg
tcattgtccattgagcaagatgcttctgaatcagagctattgctgcatttcctgacttca
ttggaagagcaaaagcaaaatcatgcttccaagttagtggaagacattagatgcttagaa
gcagatattgctgaggttgataaaaggctctgtctgaaaaatccattggttcgttcttgc
ctacaaaagaactccattaatgcaagggagaacaagtacatcattacccaaccctcaagt
tcagagctgcatttgtccccagttcttgatgcaaatgaaatgaggttgatgaggaatttt
agtcagcttgaaagtgcttacttctcaatgaggtcaaaaatccagctccctgacactgat
gctacgacatgctgggataaaaacttactgaaaaatcgtgacaatcagtatttggcccaa
aaggagggagtacagaatcccactgatcctctagggtccttctttgatggtttgtgcaag
tatgctcgctacagtaagtttgaagtgcgtggtgtactgagaactggtgacttcaacaac
tctgcaaatgtgatttgctctctttgtttcgaccgggatgaggaccattttgccactgct
ggggtatcaaagaaaattaagatatttgagtttaatgcactcctcaacgactcggttgat
attcattatccagctgtggagatgttaaacagatcaaagcttagctgcatctgctggaac
aactatattaagaactttctggcttcagctgactatgatggtgtggtcaagatatgggat
gctagtactggtcaaacaatttctcattacattgagcatgaaaaaagggcttggtctgtt
gacttctccagagtacatcccatgaagttagccagtggaagtgatgattattctgttaag
ctgtggagcactaatgagaaaaactgtctagccactatcaagaacaatgcaaatgtctgt
tgtgttcagttctccactcactccagttatttgctggcctttggttcagcggattacaga
acctattgctatgatattcggaatactagagctccatggtgcgtactggctggccatgag
aaagctgtcagttatgtgaaattcttggactctgtcactcttgttacagcatccactgac
aataccttgaagctttgggatctccaaaaaaccagtcattgtgggccatccaccaatgct
tgcagcttaacctttagcgggcatactaatgagaagaattttgtggggttgtcaaccgct
gatggctatatagcttgtggttcagaaacaaatgaggtttatgcttactatagatctcta
cctatgccaattgcatcctataagtttggttccattgatcctatttctggaaaagagact
gatgatgacagtgggctgtatgtttcaagcgtctgctggagagcaaaatcagacatggtt
gttgctgccagttcaagtgggtgcataaaagtgttgcagatggtttaa
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