KEGG   Mangifera indica (mango): 123211978
Entry
123211978         CDS       T07684                                 
Name
(RefSeq) suppressor of mec-8 and unc-52 protein homolog 1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
minc  Mangifera indica (mango)
Brite
KEGG Orthology (KO) [BR:minc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:minc03041]
    123211978
Spliceosome [BR:minc03041]
 Complex B
  Other components
   Complex B specific factors
    123211978
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st EIF3I WDR55 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_EML LisH_TPL NBCH_WD40 Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_DCAF4 Beta-prop_IFT122_1st Beta-prop_NWD2_C Beta-prop_Nup120_160 Beta-prop_IFT140_1st WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_SPT8 Beta-prop_EIPR1 Beta-prop_SCAP WD40_RFWD3 Beta-prop_Vps41 Beta-prop_NUP159_NUP214 Ge1_WD40 Beta-prop_WDR19_1st Beta-prop_WDR75_2nd Beta-prop_WDR35_TULP_N Beta-prop_VPS8 DUF7165 VPS8_N Beta-prop_LRRK2 Mala_s_1-like Beta-prop_HPS5 PROPPIN PALB2_WD40 Beta-prop_IFT122_2nd zf_topless Beta-prop_IP5PC_F DUF2963
Other DBs
NCBI-GeneID: 123211978
NCBI-ProteinID: XP_044486909
LinkDB
Position
3:14866672..14879238
AA seq 512 aa
MTLEIEARDVIKIVLQFCKENSLQQTFQTLQNECQVSLNTVDSIETFVADINGGRWDAIL
PQVAQLKLPRNKLEDLYEQIVLEMIELRELDTARAILRQTQAMGVMKQEQPERYLRLEHL
LVRTYFDPLEAYQDSTKERRRAQIAQALAAEVSVVPPSRLMALIGQALKWQQHQGLLPPG
TQFDLFRGTAAMKQDVEDMYPTTLSHTIKFGAKSHAECSRFSPDGQFLVSSSFDGFIEVW
DYLTGKLKKDLQYQADETFMMHEETVLCVDFSRDSEMLASGSQDGKIKVWRIRTGQCLRR
LERAHSQGVTSLSFSRDGSQLLSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDG
ARVITASSDCTIKVWDLKTTDCIQTFKPPPPLRGGDASVNSVHLFPKNTDHIVVCNKTSS
IYIMTLQGQVVKSFSSGKREGGDFVAATVSPKGEWIYCVGEDRNLYCFSYQSGKLEHLMK
VHEKDVIGVTHHPHRNLLATYSEDCTMKLWKP
NT seq 1539 nt   +upstreamnt  +downstreamnt
atgactttagagattgaagctcgagatgtgataaagattgtgcttcagttttgcaaagag
aattcactgcagcaaacatttcagacgctacagaacgagtgccaagtgtctttgaacact
gtggacagcattgaaacatttgttgctgatatcaatgggggaagatgggatgcaatattg
cctcaagtggcacagcttaagcttcccaggaataaattggaggacttgtatgagcagatt
gtgttggaaatgattgaacttcgtgaattggatactgctcgtgctattttgaggcaaaca
caggcaatgggtgtcatgaagcaggagcaacctgaaagatacttaagacttgagcatctc
cttgttagaacttactttgatccccttgaggcttatcaagattcaaccaaagagagacgc
cgtgcacaaatcgcacaagctcttgctgcagaagtttctgttgttccaccatcacggtta
atggctttaattggtcaggccctgaagtggcagcagcaccaagggttgctacctcctgga
acacagtttgacttatttcgaggaactgctgctatgaaacaagacgttgaagacatgtat
ccaacaacactttcccacactattaagtttggggcaaaaagtcatgctgaatgctctcgt
ttctctccggatgggcagtttcttgtttcttcctcatttgatggatttattgaggtttgg
gattatctaacagggaaactcaagaaggaccttcagtaccaggctgatgaaactttcatg
atgcatgaagaaactgtcctctgtgttgattttagcagagactccgagatgcttgcttct
gggtcacaagatggaaagattaaagtttggcgtatcagaactggccagtgcttgcgccgt
cttgaacgagcacattctcagggtgttaccagtctttctttctctcgagatggaagtcag
ttactaagtacatcctttgacagcactgcaagaattcatggcctaaaatccggaaaattg
ttaaaagaatttcgtggtcactcatcttatgtgaatgacgctatctttacaaatgatgga
gctcgagttattactgcctcaagcgattgcacaataaaagtctgggacttgaagaccaca
gattgcatacagacatttaagcccccacctcctttgaggggaggagatgcttctgtgaac
tctgttcatctattcccaaagaacactgatcacattgttgtatgcaataagacgtcatca
atatacataatgacccttcagggacaggttgtaaagagtttttcatctggcaaaagagaa
ggtggagactttgttgcagctactgtttcaccgaaaggggaatggatctactgtgttggg
gaagacaggaacctgtactgcttcagttatcagtctggtaaattagagcatctaatgaag
gtccatgaaaaggatgtaatcggtgtcactcatcatcctcacagaaatcttcttgcaaca
tacagtgaggattgcactatgaaattatggaagccttga

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