Mangifera indica (mango): 123212009
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Entry
123212009 CDS
T07684
Name
(RefSeq) RGG repeats nuclear RNA binding protein A-like isoform X1
KO
K13199
plasminogen activator inhibitor 1 RNA-binding protein
Organism
minc
Mangifera indica (mango)
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
minc03041
]
123212009
Spliceosome [BR:
minc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
123212009
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HABP4_PAI-RBP1
Stm1_N
Motif
Other DBs
NCBI-GeneID:
123212009
NCBI-ProteinID:
XP_044486958
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Position
3:complement(4283085..4286440)
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AA seq
365 aa
AA seq
DB search
MATMNPFDLLGDNDNEDLSQLVSVQQPKLADKPKKSVSTPQAQSAAKPAPKFPTKPTPPT
QAVVRDSKTESGRGGGRGSRGRGFGRGGGGRGYDRDSSNNDTFGGSNGFSGGYKPSEEGE
EGKPSERRSYGAPRGSFRGGRRGVFGNGESGEGDRPRRQFERRSGTGRGNEIKRDGAGRG
NWGTPADEIAPETEEPVVENEKNVSADKPAGEEDVGANKENPVNEQEDKEPEEKEMTLDV
YEKLLEEKRKALLALKTEERKVDVDKEFKSMQPLSSKKSNDDIFVKLGSDKDKRKDAADK
EEKAKKSVSINEFLKPAEGERYYNPGSRGRGRGRGSRGGYGGYSSSNVAAPSIEDPGHFP
SLGGK
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atggccacaatgaacccctttgacctgctgggtgacaatgataacgaagaccttagtcag
ctcgtctctgttcagcagcccaagctcgctgacaagcctaagaaatctgtgtcaactcct
caagctcagtcagcggccaagccggcgccgaaatttcccaccaagccaacccctcccact
caagctgtagtgagggattcaaagactgaaagtggacgtggtgggggccgtggcagtcgt
ggtcgtggttttgggcgtggtggaggaggtcgtggctatgaccgagattcaagcaacaat
gacacatttggtggcagtaatggattttctggaggatacaaaccctctgaagagggagaa
gaaggaaagccatctgaaaggcgtagttatggtgctcctcgtggttccttccgtgggggt
cgccgtggtgtctttggcaatggagaatctggggaaggagatcgtccacgtagacaattt
gaacgtcgcagtgggacagggcgtggcaatgagattaaacgtgatggggctggtcgtggc
aattggggaactccagctgatgaaattgcaccggagactgaagagcctgttgttgaaaat
gagaagaatgtgagtgctgacaagcctgctggtgaagaagatgtgggtgccaataaggag
aatcctgtgaatgagcaagaagataaggagcctgaagaaaaggaaatgactttggacgtg
tatgaaaagcttcttgaagagaagaggaaagctttgcttgccttgaagactgaggaaagg
aaggttgatgtggacaaagagttcaagtccatgcaaccactatcaagtaagaaaagcaat
gatgacatctttgtcaaactgggctctgataaggacaaacgcaaagatgctgctgataaa
gaagagaaagctaagaagtctgttagcataaatgagttcttgaaacctgctgaaggagag
aggtactataaccctggcagtcgtggtcgaggccgtggccgtggttcaagaggtggatat
ggaggctactcatccagtaatgtagcagccccatctattgaggatcctggacattttccc
tcattggggggcaagtga
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