Mangifera indica (mango): 123212023
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Entry
123212023 CDS
T07684
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 2-like
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
minc
Mangifera indica (mango)
Pathway
minc03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
123212023
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
minc01002
]
123212023
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
minc04121
]
123212023
Enzymes [BR:
minc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
123212023
Peptidases and inhibitors [BR:
minc01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
123212023
Ubiquitin system [BR:
minc04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
123212023
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
Motif
Other DBs
NCBI-GeneID:
123212023
NCBI-ProteinID:
XP_044486975
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All DBs
Position
3:13593431..13598955
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AA seq
989 aa
AA seq
DB search
MGKGVDKKSRAAKEKRATVLSPKNVPQQSNHVESSNVGVTVVKERKPCVHLDKGVDLDKF
SAKFQSSNPIRCEDCREGANDRRGRKGKSKNAKKKGGGSADSKSGSKAIWVCLDCGHYAC
GGVGLPTTPQSHAIRHARQARHSLVIQWENPHLRWCFPCNTLIPVEKTEENGENKDVLSE
VVKLFKGKSTEGSSVDVEDVWFGSGSGSVTSEIKSESIIPVGGCLDGKAGYVVRGLTNLG
NTCFFNSVMQNLLAMGRLRDYFLNMDVSFGPLTIALKKLFTETKSEAGLRNVINPRSFFG
CVCSKAPQFRGYQQHDSHEFLRFLLDGLCTEELVVRKKVNAFEENENSSNPGPTFVDSVF
GGLISSTVCCVECGHSSTVYEPFLDLSLPVPTKKPSPKKAQPSRAKKTKPPPKKSGKVQG
KANKDTDIVTVQNSPSPAAISESSCVMKSTASSTGKVGSSSDGSSLLDSVGSSTIAAESS
SSQKFSAVAQPEDEQVLDHSMNQTVASLDDFTWLDYVELESMSDRHDLNLRSNDLFVQDS
GDKDDVSGDILLESSQTSSLHEETNSKQDSSSVNPWEDEQPLHAQDSEVILLPYNEESPT
TGEIMSGDAEASSSVIGCGQEELEFDGFGGLFDEPEIAAGPVAGPCFGSDKVESGFVLGS
SSGSDPEEVDNSNSPVSVEICLAHFIKPELLTDDNAWECESCSRNVQHQKSETLKKQAKL
ASQVLINGGETRKQNDQKTMKDASCTSEVKTLSNGHIKTDIDLDTSGESLALHKAKIDCL
NQTCVKFENGQTCEINPVISQGEEGTIETNDAVPVQESQQNIAHQVEDSHSFDESDSSLC
APADALSTEVINSLKVMVKRDATKRVLINKAPPILTVHLKRFNQDARGRLSKLNGHVNFS
EMINLRQYMDPRCTDKEKYNYRLVGVVEHLGGMRGGHYVAYVRGAKLEGKTQKENEGCLW
YHASDVYVRESSLEEVLGCEAYILFYEQV
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atggggaaaggggttgataagaagagtagagctgctaaggagaagcgagctacagtccta
tctcctaaaaacgttcctcaacaatctaatcatgttgagagttctaatgttggtgttaca
gtggtgaaagagagaaaaccttgtgtccatcttgacaagggtgttgatttggataaattt
tctgctaaatttcagtcttcaaatcctataaggtgtgaggattgtcgagaaggtgcaaat
gatagaagagggaggaagggaaagagtaagaatgcgaagaagaaggggggtggttcagca
gattcaaaatctggctcaaaagccatttgggtttgtttagattgtgggcattatgcttgt
ggaggggttggacttcctacaacccctcaaagccatgcaattcggcatgctagacaagct
cgacattctttggtgatccaatgggaaaaccctcatctccggtggtgctttccatgcaac
acactcattccagttgagaaaacagaggaaaatggtgaaaataaagatgtattatcagag
gttgtaaaattatttaagggtaaatcaacagaaggttcatcagtggatgttgaggatgtt
tggtttggtagtggcagtggcagtgttaccagtgaaatcaaatctgaaagcattatacca
gttgggggttgtttagatggaaaggctggctacgtggtaagaggtttgactaaccttggg
aatacttgcttctttaattcagtcatgcagaatcttctagccatgggtagattgcgagat
tacttcctgaatatggatgtatcttttggccctcttactattgctttgaagaaacttttc
actgaaacaaaatcagaggcagggttgagaaatgttataaatccaagatctttttttgga
tgtgtctgttctaaggctccccagtttaggggatatcagcaacatgatagtcatgaattt
cttcgtttcttacttgatggactgtgtactgaggagttggttgtcagaaaaaaagttaat
gcttttgaggaaaatgagaattcttcaaatccaggtcctacttttgtggattctgtattt
gggggactgatttctagtactgtttgttgtgtggaatgtggacattcctcaacggtttat
gagccatttttagatctctctcttccagttccaaccaagaaaccttcgcctaaaaaagcc
caaccctctcgagccaagaaaacaaaaccaccaccaaagaaaagtggaaaggttcaaggt
aaagctaacaaagatactgatattgtaacagtgcaaaattctccaagtccagctgccatc
agtgagtcttcgtgtgtgatgaagtctactgcatcttccactggaaaagtgggaagttct
tcagatggttcttcattattagattctgttggctcatcaactattgccgctgaaagcagt
tcttctcagaaattttcagctgttgcacagcctgaggatgaacaagttttggatcattca
atgaaccaaacagtggcttcattggatgattttacgtggttggattatgtggaactagaa
tctatgtcagataggcatgatttgaatttgcgaagtaatgatttatttgttcaagattct
ggagataaggatgacgtttcaggtgatatcttattggagagtagtcagacttcttcactc
catgaagagacaaattcgaaacaggattcttcttctgtgaatccttgggaggatgagcaa
ccattgcatgctcaagattcagaagttatcttacttccatacaatgaagaaagtcccact
actggggagattatgagtggagatgctgaggcctcctcatcagtcattggctgtggacaa
gaggaattggaatttgatggctttggtgggctatttgacgaacctgaaattgctgctggg
ccagtcgctgggccctgtttcggtagtgataaggtggagagtggttttgtactaggaagt
agcagcggatctgatccagaagaggttgataattcaaattctccagtgtctgtagagatt
tgtttggcccattttataaagccagagcttctcactgatgataatgcttgggaatgtgag
agctgttcaaggaatgtgcaacaccagaagtcggaaactttgaagaagcaggcaaaactt
gcttcacaagttttgataaatggaggtgagactagaaagcaaaatgatcaaaagactatg
aaagatgcatcctgtacttctgaagttaaaactcttagtaatggacacatcaaaactgat
attgatctggacacttctggtgagagcttggctttacataaggcgaaaattgattgctta
aatcaaacttgtgtgaaatttgaaaatggtcagacatgtgagattaatccagttatttct
caaggggaagaaggaacaatagagacgaatgatgcagttcctgtgcaagaaagtcaacaa
aacattgctcatcaagttgaagattctcatagttttgatgagtctgatagttctctgtgt
gctcctgctgatgctctgtcaactgaggtgataaattccctaaaagtaatggtgaagcgg
gatgcaaccaaaagggtccttattaacaaggccccacctattttgactgttcatctgaag
aggttcaaccaagatgctcgtggtcgtttgagtaaattgaatggccatgtaaatttcagt
gaaatgattaatcttagacaatatatggatcccaggtgcacagataaagagaagtacaat
tatcgtctagttggagtagttgagcatttaggaggcatgagagggggtcactatgtagcc
tatgtgagaggtgcaaaacttgaaggaaagacacagaaagaaaatgaaggttgcctgtgg
tatcatgccagtgatgtgtatgtgcgtgaatcttcccttgaagaagtccttggctgtgag
gcatacattctattctatgaacaagtttga
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integrated database retrieval system
