Mangifera indica (mango): 123212090
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Entry
123212090 CDS
T07684
Name
(RefSeq) protein ROOT INITIATION DEFECTIVE 3-like
KO
K14829
pre-rRNA-processing protein IPI3
Organism
minc
Mangifera indica (mango)
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
minc03009
]
123212090
Ribosome biogenesis [BR:
minc03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
123212090
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
NBCH_WD40
WDR55
EIF3I
Beta-prop_EML
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_SCAP
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
WDR90_beta-prop_4th
Beta-prop_Vps41
Beta-prop_DCAF12
Beta-prop_IFT122_1st
WDR54
Beta-prop_IP5PC_F
Beta-prop_HPS5
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
123212090
NCBI-ProteinID:
XP_044487066
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Position
3:3712355..3716087
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AA seq
483 aa
AA seq
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MSEGSEALVVCSDRSLKVGMTIWDIETGDQILRIPSCAASPHGLLCLRNQYLAASQVNRH
GSLGGGSVFMWALNKPQPPLRSYTMEAMGPICCSNDGVYLAGGASSGNAYIWEVANGRLL
AMWRAHYKSLKCMVFSDDGSLLISGSDDGMICIWSMIRLMKKTSEMMHHSNHSESCLLEM
EDSGSETSLLHYSLEHKSSITGLLTVSSSHFVSCSLDATCKVWDLISGRLIQTQVYPLAL
TAILLDLVRLLMFVGSVDGRIFVNRLEFGIGLDDPIIVAEDESRMLKGHSEAITALTLSA
SYLISASEDRTVCLWDVSRRVIVRRFDHDKGPVTNLLVIPKFSLLSSSSHQKVSNKFRIS
LLDKYPQQDNFSKGMKTLLHSHFSRQDDEFCKIFQGTKSLDQYMCELQLEGTPAAMEMKV
ETSTDYRTWATRMTKHVMEMNKHLQSRLLDLMQCRLLRSREADLPATRNKKKLKIESLSP
SDE
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaggaagtgaggcattggtggtttgtagtgataggagtttaaaagttgggatg
acaatttgggatattgaaaccggggatcagattcttcggataccgagttgtgctgcttct
ccccatggcttattgtgtttgagaaatcaatatcttgcagcttctcaggttaatagacat
ggctctcttggtggtggtagtgtcttcatgtgggcattaaataagcctcaaccaccactt
cgaagctacacaatggaagccatggggccaatttgttgctcaaatgatggtgtgtatctt
gctggtggtgcttcttcagggaatgcttatatctgggaggttgctaatggaagattactg
gctatgtggcgtgcccattataaatctttaaagtgcatggtcttttcagatgatggttcc
cttcttatttctggttcagatgatggtatgatctgcatttggtctatgattagattaatg
aagaaaacctctgaaatgatgcatcattccaatcattcagagagttgcttgttggaaatg
gaagattctggcagtgaaacttctttgttacattattcattggagcataagtcctccatt
accggtttgctaactgtatctagctcacattttgtatcttgctcccttgatgcaacatgc
aaggtttgggatttaatctcaggaaggcttatacaaacacaagtttatcctctagcttta
actgcaattcttcttgatctggtacggctgctcatgtttgtaggcagtgttgatgggaga
atatttgttaacaggcttgaatttgggataggactggatgaccctataattgttgcagaa
gatgagtctcgcatgcttaaaggacacagtgaagcaataactgcattgaccttgagtgca
tcctatctgatatcagcatcagaagatagaactgtctgtctctgggatgtcagtcgtagg
gtgatcgttcgaagattcgaccatgataaaggaccggtaactaatctgttagtgattcca
aagttctcactactttcatcgtcaagccatcaaaaagtgtccaataagttccgcatttct
ctgctggataagtatcctcagcaagataacttttcaaagggaatgaaaaccctcctccat
tcacatttttctagacaagatgatgaattctgcaaaattttccaaggaaccaagtcacta
gatcagtatatgtgtgaactgcagctagaaggaacacctgctgccatggaaatgaaagtg
gaaacaagcacagattatcggacatgggccacaagaatgaccaagcatgtgatggagatg
aataagcatttgcaatctcgactgctggaccttatgcaatgccgattgttaaggtccaga
gaagctgacttacccgcaaccagaaacaaaaagaagctcaagatagaaagcctatcaccc
agtgatgagtag
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