Mangifera indica (mango): 123212092
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Entry
123212092 CDS
T07684
Name
(RefSeq) probable pectate lyase 12
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
minc
Mangifera indica (mango)
Pathway
minc00040
Pentose and glucuronate interconversions
minc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
123212092
Enzymes [BR:
minc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
123212092
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Gene cluster
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Pec_lyase_N
PRAP
Motif
Other DBs
NCBI-GeneID:
123212092
NCBI-ProteinID:
XP_044487072
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Position
1:complement(3438262..3441228)
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AA seq
477 aa
AA seq
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MPQHSSTTMFRSNCIVLISLLSSFFPLGKAMLNLTLPTPHPNPEEVVQELHRRVNASMSR
RQTLQISEKDQSSCITGNPIDDCWKCDPDWANNRQRLADCAIGFGQYAMGGKNGEYYIVT
DSSDDDAVTPKPGTLRYAVIQTQPLWIVFPSNMHIKLSQELIFNSYKTLDGRGANVHITG
GGCITLQYISNVIIHNIHVHHCVQSGEANVRSSPTHFGWRTKSDGDGISIFGSKDLWIDH
CSLSHCKDGLIDAVMGSTGITISNNYFSHHNEVMLLGHSDGYLPDSGMQVTIAFNHFGEK
LVQRMPRCRRGYIHVVNNDYTEWEMYAIGGSGNPTINSQGNRYNAPSNPNAKEVTKRVDT
AEGEWKGWNWRSEGDILVNGAFFVASGAGVEVKYEKAYSVEPKSADLIVQLTWHAGVLGV
GGRDNNLGMWSRGPGDETEFGSGSRKQMMPFSTSALIALSCFLFLYSSTWEKFNVIC
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgccacagcattcttccacaacaatgtttcgcagcaactgcattgtcttgatctctctt
ttgagctcatttttcccacttggtaaagcaatgctcaacctcaccttgcctactccccac
cccaatcccgaagaagttgttcaagaacttcacagaagagtaaatgcttcaatgtcaaga
aggcagacgctacaaatttctgaaaaggaccaatcttcgtgcattactggcaaccccata
gacgactgctggaaatgtgacccagactgggccaataaccgccagcggctagctgattgc
gccattgggttcggccagtatgcaatggggggcaaaaatggtgaatactatattgtcact
gattcttcggatgatgatgctgtgactccaaagccaggcacactaagatatgctgtaata
cagactcaacctctgtggatagtgttcccaagcaacatgcacataaaactatctcaggaa
ctcatctttaatagctacaagacccttgacggtcgcggcgccaatgtccacattaccggc
ggtggctgcattacactgcagtacatcagcaatgtcatcattcacaacattcatgttcac
cactgtgtgcagtcaggggaggctaatgtacgctcgagtccaacgcatttcgggtggaga
acaaagtcggacggtgatgggatctccatattcgggtccaaagacttatggattgatcac
tgttcactgtctcactgcaaggacgggctgattgatgccgtgatgggttccacaggcatc
acaatatcaaacaattatttttctcatcacaatgaagtaatgctgcttggtcacagtgat
ggctacttgccggactcaggaatgcaagtgacaatagcgtttaatcactttggggagaag
cttgtgcagagaatgccaagatgcagaaggggatacattcatgtggtgaacaatgattat
acagagtgggaaatgtatgccattggtggtagtggaaatcccaccattaatagccaagga
aatcgctataatgcaccttcgaatcccaatgctaaggaggtgacaaagagagttgataca
gctgagggagaatggaagggatggaattggagatcagaaggagacatactggtgaatggt
gcattttttgtggcatcaggtgccggagttgaggtgaaatatgaaaaagcttatagtgtg
gagcctaaatcagctgatcttatcgtgcagctcacttggcatgctggtgttcttggtgtt
ggtggcagggacaacaacctgggaatgtggagcagaggacctggtgatgaaaccgaattc
gggtcaggaagcagaaagcaaatgatgcctttctcaacttctgctttaattgcattgtct
tgcttcttattcttgtattcttcaacctgggaaaagtttaatgtgatctgttag
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