KEGG   Mangifera indica (mango): 123212251
Entry
123212251         CDS       T07684                                 
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
minc  Mangifera indica (mango)
Brite
KEGG Orthology (KO) [BR:minc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:minc03036]
    123212251
   03400 DNA repair and recombination proteins [BR:minc03400]
    123212251
Chromosome and associated proteins [BR:minc03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    123212251
DNA repair and recombination proteins [BR:minc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     123212251
SSDB
Motif
Pfam: MMS19_N MMS19_C HEAT_EZ HEAT_EF3_N
Other DBs
NCBI-GeneID: 123212251
NCBI-ProteinID: XP_044487273
LinkDB
Position
3:complement(7731238..7741782)
AA seq 1156 aa
MAQLSQLSQHIESFVNLSSSPAHQAASLDAIVSLLKNNVLTIEKLVIEMDMYLTTTDDVT
RARGMLLLGEVLSKLASKPLDDATIHSLIVFFSDRLADWKALRGALVGCLALVSRKSSGD
VVTANDAKAVARSYLQNLQVQSLAQHDRKLCFELLEGLLQRFPDAIASLGEDLLYGICEA
IDGEKDPQCLMLTFCIVEVVVRVFPDDLLASFASDLFEILGCYFPIHFTHSMGEDFDVKR
DDLSTALMRAFSSTPLFAPFAIPLLLEKLSSSLPSAKVDSLKYLSSCTLTYGADCIAKHA
GAIWSSIKDVIYFSLEHTLSFGLESLDGPGFQENAILQEALTLLQIVIKQNTDLFLSQII
ADEDINFILKSISNFNSYNKIPMQSKQKLHAVGCILSVSVKASLSSCIRVIESFFPTLVN
ALGLSVRNLPQDCFPSDNYVFAERLNHAALYLCIELIAACRDVVSGSEQFMTESGFAHEK
WCCLIQSFSVSLTKAFTFTLAKSAKEDAYDADAYFGVKGLLILGTFPGGFFTISKSIFED
ILLTLTSIITLDFEKTLLWKLALKALVYIGVSVDRCHESEKKLSYMGIVIDKIVSLASFH
DFSMPLPLKLEAISEIGASGANYLLKIVQGLEEAIFDNLSEISIHGNSQSAEIVVQLLEC
YSDKVFPRIHETGSFEEVSLRFALNIWGLLENCVAFSVQAHENGLLDATMKAMKLAIASC
SVETQTIIVQRAYNVLSSGTSFPLKEPMVAIPIQLKGLQLTQEIDIGSSRDEWIYSLFAS
VIIALRPQTHIPNVRLVLQLFMTTMLKGNVPAAQALGSMVNKFVLNTNVIDVSSTCTLEE
AMDIIFNMSLCSFDDIASSRIYGRMNNGGEMCLNSICRGVVNGRSLQIHAVTGLAWIGKG
LLMRGHEKVKDITMILLECLLSNDQKGPLPVEQDSSEDSSKQGVHPSVMKCAADAFQILM
TDSENCLCRKFHATIRPLYKQRFYSTIMPILQSLIMKSESSFSRSMLCRACAYIISDTPV
VVILNEAKKVIPILMEGLSVLCNDVLDKQILYSLVLVLSGILTEKNGQEAILECAHIIIN
HLIGLISYSHMMLVRETAIQCLIAMSSLPQARIYPMRVQVLKAISKALDDPKRAVRQEAV
RCQHAWAPVVSRNLQF
NT seq 3471 nt   +upstreamnt  +downstreamnt
atggcacaattgagtcagctgagtcaacacattgagtcattcgttaacttgtccagctcg
cccgcccaccaggctgcaagtttggatgcaattgtttctttgttgaagaataatgtattg
actatagagaaactggtcatagagatggatatgtatttgactaccactgatgatgtcact
cgtgcaagaggcatgcttcttcttggagaagtcctttcaaagcttgcatcaaagccactg
gatgatgctactatacatagcctgatagtattcttctcagatagactggcagattggaaa
gctctacgcggtgcacttgttggttgtttggcactagtgagtaggaaaagtagtggtgat
gtggttactgcaaatgatgcaaaagcagttgctcggtcttatttacaaaacctacaggtg
cagtcattagcacaacatgacaggaagctttgctttgaacttttggaaggcctattgcaa
cgctttcctgatgccattgcttcactgggtgaagaccttctatatggaatctgtgaagct
attgatggggagaaggatccacagtgcttaatgctaactttttgcattgttgaggttgtg
gtgcgagtatttccagatgatctgcttgcaagttttgctagcgacctttttgaaatttta
ggctgttacttcccaattcattttacgcattctatgggtgaagactttgatgtgaaaagg
gatgatctttcaactgcattgatgcgagcattttcctccactcctctttttgctcccttt
gccattccattgctccttgaaaaactttcttcttctttgccatcagcaaaggttgattct
ctgaagtacctcagcagttgtacactgacatatggtgcagactgtatagcgaaacatgct
ggagcaatctggtcttcgataaaagatgtgatatacttttcactggagcatactctgtcc
tttggtttggaatcactggatggccctggctttcaggagaatgcaattttacaagaagct
ctaactcttttgcagatagttatcaagcaaaacactgatttgtttttaagtcagattata
gctgatgaagatataaattttattttaaaatccatctctaattttaatagttacaataaa
attcctatgcaaagcaagcagaaactacatgcagttggttgtatcctttctgtctctgtc
aaggcttctctttcctcctgcattagagttattgaaagtttcttccccaccctggtgaat
gctttggggctttcagtcagaaacttgcctcaggattgctttccaagtgataattatgtg
tttgctgaaaggcttaatcatgcagctctttatctctgcattgaacttattgcagcatgc
cgagatgtagtatcaggctctgaacaattcatgacagagtctggctttgcacatgagaaa
tggtgttgcttgattcagagcttttctgtttcattaactaaggccttcacttttaccttg
gcaaagagcgcaaaagaagatgcttatgatgcagatgcatattttggagtgaagggtttg
ctgattctgggcacattccctggtggttttttcacaatatcaaaatccatatttgaggat
attttattgacattgacatcaattattactttggacttcgagaagactttgttgtggaag
ctggcgctaaaggcactagtgtacattggtgtctctgttgatagatgtcatgaatctgag
aagaaactgagctacatgggtattgtcatagacaagattgtttcattggcgtctttccat
gattttagtatgccattgcctctcaaattggaagcaatttctgagattggtgcaagtgga
gcaaattatttgctgaaaattgttcaaggactagaagaagctatatttgacaatttgtct
gagatttctatccatgggaattctcagtcagctgaaatcgtggttcagcttttggaatgc
tactcagataaggtgtttccacggatccatgaaactggaagctttgaggaagtttcgctg
aggtttgctctaaatatttggggccttcttgaaaattgtgtggccttcagtgtccaggct
catgaaaatgggcttcttgatgctacaatgaaggcgatgaagctagccattgcaagttgt
tcagtagagactcagaccataatagttcaaagagcttacaatgtactttcatcaggcact
tcttttccattgaaggagccaatggtcgccattccaatccaactgaaaggactacagctt
actcaagagatagacattggttccagtagagatgaatggatatattcactatttgcatca
gtaattatagcacttcgtcctcaaacacacattccgaatgtgaggctggtattacagcta
tttatgacaaccatgctcaagggtaatgttccagcagctcaggcattgggttccatggtt
aacaaatttgttctgaacaccaatgtaatagatgtatcaagtacatgtaccttggaagaa
gccatggatataattttcaacatgagtttatgtagctttgatgatattgcttcttcaagg
atatatggtaggatgaataatggtggtgagatgtgtcttaacagtatttgccgtggtgtt
gtaaatggtagatctcttcaaatccatgcagtcactgggctggcatggattggaaaaggt
ttgcttatgcgggggcatgaaaaagttaaagacataactatgattctcttagagtgctta
ttatcaaatgaccaaaaaggtcctttaccggtggagcaggattcctccgaagacagctct
aagcagggtgtgcatccatccgtgatgaaatgtgctgcagatgcatttcaaattcttatg
actgattctgaaaattgtctatgccgaaaattccacgcaacaatacggccactttataag
caacgtttttattcaaccataatgccaattctgcaatcgttgattatgaaatctgagtca
tcattttcaagatcaatgctgtgccgggcttgtgcatacattatatcagatactcctgta
gtagttatcttgaatgaagccaagaaggtaattccaatattgatggagggattatctgtg
ttatgtaatgatgttttggataaacaaattctgtacagtctcgtgctggtcttatctgga
atattgacagaaaaaaatggacaagaggcaatccttgagtgcgcacatatcatcattaat
catcttattggattaattagctactctcatatgatgcttgttcgagagacagcaattcag
tgtcttattgccatgtctagcctgcctcaagcacgaatttaccccatgagagtgcaggta
ctaaaagcgatatcaaaggcactagatgacccaaagcgagctgttcgtcaggaagctgta
agatgccagcatgcatgggcaccagttgtatcaagaaatcttcagttctga

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