Mangifera indica (mango): 123212505
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Entry
123212505 CDS
T07684
Name
(RefSeq) lys-63-specific deubiquitinase BRCC36-like isoform X1
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
minc
Mangifera indica (mango)
Pathway
minc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
123212505
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
minc01002
]
123212505
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
minc04121
]
123212505
03036 Chromosome and associated proteins [BR:
minc03036
]
123212505
03400 DNA repair and recombination proteins [BR:
minc03400
]
123212505
Peptidases and inhibitors [BR:
minc01002
]
Metallo peptidases
Family M67
123212505
Ubiquitin system [BR:
minc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
123212505
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
123212505
BRISC complex
123212505
Chromosome and associated proteins [BR:
minc03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
123212505
DNA repair and recombination proteins [BR:
minc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
123212505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCC36_C
JAB
Prok-JAB
UPF0172
Motif
Other DBs
NCBI-GeneID:
123212505
NCBI-ProteinID:
XP_044487603
LinkDB
All DBs
Position
3:complement(6937588..6943332)
Genome browser
AA seq
435 aa
AA seq
DB search
MSLTAVKMSEDVWLTCLTHALSTETEEIMGLLLGDIEYSKSGNVTALIWGASPQSRSDRR
KDRVETNPEQLAAASAQADRMTMLTGRTTRVIGWYHSHPHITVLPSHVDVRTQAMYQLLD
SGFIGLIFSCFSEDINKVGRIQVIAFQSSDGKQNQMPRPISLSPVNKNAVINLDSSLSSS
ENLSVRSGSARAESPEQDTGDSRTATGSWKGLGRSSDLGGFFANADTNHLERERVGGNYQ
TGDLSNIIADIDPMDMSESMQEAMHRSNLDMSGAEYIRKEIPLHVLPTSSLLKLDSPLTS
FTDLQHVLYQEEQAAYNQAILQNIRDGKVHPLTFIHHTSTYQASICKLIEYCLSPAINVL
QDRLRENELRLAMLTDEAKMLETDASRGSESSSSPHHTPSHGLRGSALVGHRDLHGSANV
RTLSSPGSRSRKGGS
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgtctctaaccgccgttaaaatgtccgaggatgtttggttaacttgtcttacgcacgca
ttgtctactgagactgaagagatcatgggtcttcttcttggtgatatcgagtactcaaaa
agtggtaatgtcactgcactaatttggggagcatcacctcagtctcgatctgatcggcga
aaggatcgagtagagacaaatcctgaacagttggctgctgcgtcagctcaggccgataga
atgaccatgttgactggaagaacaacaagagtcatcgggtggtaccattcacatccacat
attacagttcttccttcccatgttgatgtgcggacacaagcaatgtatcaacttctagat
tctgggtttattgggctgatattttcatgttttagtgaagatataaacaaggttgggaga
atccaagttattgcattccagtcctcagatgggaagcagaatcaaatgccaagaccaatt
tctttatcacctgttaataaaaatgcagttatcaatttggactcatctttaagttcctca
gaaaatttatcagtgagatctggaagtgcaagggcagagagccctgaacaagacaccggt
gattccagaacagcaacaggatcatggaagggtctgggaagatcttcagacttgggtggt
ttctttgcaaatgctgataccaaccatcttgagagagagagagttggaggaaactaccaa
actggtgatttaagtaacatcattgcagatatagatcccatggatatgtcagaaagtatg
caagaggccatgcaccgttcaaatttggacatgagtggtgcagagtatatcaggaaagaa
atccctcttcatgttttgccaacctcgtctcttctgaaacttgattcacctctaacatca
tttacggatttgcaacatgtactatatcaagaggaacaggcagcatataaccaagctata
ttgcaaaatataagggatgggaaagtgcatccgcttactttcattcatcacacatctaca
tatcaggcttcaatctgcaaattaattgaatattgtttaagtcctgccataaatgtgtta
caggatcgattgagagagaatgaacttcggttggcaatgctaacagatgaagctaagatg
ttggagactgatgcctctagggggagtgagtccagttcatctccccatcatactccatct
catggtctcaggggaagtgctttggttggtcacagggacttgcatggctcagctaatgtg
aggaccttatctagtcctggtagccgcagcagaaaagggggttcttag
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