Mangifera indica (mango): 123212711
Help
Entry
123212711 CDS
T07684
Name
(RefSeq) pre-mRNA-splicing factor syf2-like isoform X1
KO
K12868
pre-mRNA-splicing factor SYF2
Organism
minc
Mangifera indica (mango)
Pathway
minc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123212711
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
minc03041
]
123212711
Spliceosome [BR:
minc03041
]
Complex B
Other components
Prp19-related factors
123212711
Complex C
123212711
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SYF2
Motif
Other DBs
NCBI-GeneID:
123212711
NCBI-ProteinID:
XP_044487786
LinkDB
All DBs
Position
4:complement(13088623..13092456)
Genome browser
AA seq
308 aa
AA seq
DB search
MEEERRVHPDCINASNPYHECVEYCFRKIAEAKMQMGKKETEVPVSGGSSQSNTSTPDTV
AHFNDERPNFEEHSHSDHDQPAEESLEGDITKLTGRQKRLFDLRLKMNEARKANQTAMVA
EKKRMESPQESRGISKQKWLEERKKKIGKLLDSNGLDMTKAHMLDTQEAAEAKYKKWEKD
PAPFGWDVFNQKTLYNAYKKRTKNVEVDLEEYNRLKEADPEFYRDASSLQYGKAPKVSED
KVERMVKELKDQEEKRKSFSRRRRFHEEKDIDSINDRNEHFNKKIERAFGKYTLEIKNNL
ERGTALPD
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagaaagaagagttcacccagactgtattaatgcatcaaatccataccatgaa
tgtgtggaatattgcttcagaaaaattgctgaagcaaagatgcaaatgggtaaaaaagaa
acggaagtgccagtcagtggtggcagcagtcaatccaacacatctactcctgacacggtt
gcccatttcaatgatgaaagaccaaattttgaggaacattcacatagtgaccatgaccaa
ccagctgaggagagtttggaaggagacattacaaagcttacaggaaggcaaaaaaggttg
tttgacttgaggcttaagatgaatgaggcaagaaaagcgaatcaaacagcaatggttgct
gaaaagaaaagaatggaatctcctcaggaatctaggggcatctctaaacaaaaatggctt
gaggagaggaagaaaaagataggcaaacttctagattcaaatggtttggatatgaccaag
gcacatatgctagatacgcaagaggcagcagaggcaaaatataagaaatgggagaaggat
cctgctccatttggttgggatgtgttcaatcagaagacattatacaatgcttataagaaa
cggacaaagaatgttgaggttgatttagaagaatataacagactaaaagaagctgatcca
gagttctacagggatgcttcaagcctccaatatgggaaggctccaaaggtctctgaggat
aaagttgagaggatggtgaaagaactcaaggaccaggaggagaaaaggaagtcctttagc
aggaggaggaggttccatgaagagaaagacattgactcaattaatgaccgtaatgagcat
ttcaacaagaagattgagcgagcatttggtaaatacacactggagatcaaaaataatctc
gaacgaggaactgccttgcctgactaa
DBGET
integrated database retrieval system
