Mangifera indica (mango): 123212885
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Entry
123212885 CDS
T07684
Name
(RefSeq) DDB1- and CUL4-associated factor 8-like
KO
K11804
DDB1- and CUL4-associated factor 8
Organism
minc
Mangifera indica (mango)
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
minc04121
]
123212885
Ubiquitin system [BR:
minc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
123212885
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Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
WDR55
Beta-prop_EML
EIF3I
Beta-prop_IFT122_1st
Beta-prop_EIPR1
NBCH_WD40
Beta-prop_SPT8
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_HPS5
VPS8_N
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
123212885
NCBI-ProteinID:
XP_044488047
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All DBs
Position
4:complement(13229593..13233030)
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AA seq
490 aa
AA seq
DB search
MSKNKRPRSILDSPATVVDVWKRELGLLSTRNFVYRRRASEDLVCRLDIYKKLVKHQGCV
NTVSFNADGDILVSGSDDRRVILWDWVTGHVKLSFDSGHYNNVFQARIMSFADDRSIVTC
AADGQIRHAQILEGGGVETTLLAKHQGRANKLAIQPGSPHILYTCGEDGLVQHIDLRTRV
ATELFTCRPVDDRKSNMPVVNLNAIAIDPRNPNLFAVAGLDEYTRLYDIRKYKWDGSTDF
GQPADYFCPPNLIGDDQVGITGVAFSNQSELLVSYNDEFIYLFTQDMGLGPNPVPSSPLS
TGSDASEMAPGHPSPSSTMDVGDIVTPQVYKGHKNCVTVKGVDFFGPNCEYVVSGSDCGR
IFIWKKKGGELIHVMKADKHVVNCIEPHPHSIVLASSGIESDIKIWTPEAIERATLPVKI
EQFEPKARGWMHSVISLDDLMMQLFSLQRQRTDYDPEHVGESLAADRELRELLLTFNANG
DTSSDAGEGP
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagaacaagagacctagaagtatcctagactcaccagccactgtggtcgatgtt
tggaaacgcgaactcggccttctctccacccggaatttcgtgtaccgtcgtcgtgcctct
gaggatcttgtctgtcgacttgatatttacaagaagcttgttaaacatcaaggttgtgtg
aacacagtaagcttcaatgcagacggtgatattctggtgtcaggctctgatgacaggcgg
gttatactttgggattgggtaactgggcatgtcaaactttcattcgattctggtcactat
aacaatgttttccaggcgagaattatgtcttttgcagatgatcgcagcattgttacctgt
gctgctgatgggcagattcgtcatgctcaaattctggaaggcggtggagtggagactact
ttgcttgccaaacatcaaggacgggcaaataaattggctattcagcctggaagccctcat
atactttatacctgtggtgaagatggactggtgcaacatattgatttgagaaccagggtt
gctactgaacttttcacttgccgtccagttgatgatagaaaaagtaacatgccagtagta
aatctaaatgcaattgcaattgatcccagaaacccaaatctctttgcagttgctggactg
gacgaatatactcgactttatgatattcgcaaatataagtgggatggttctacagatttt
ggtcaacctgctgattacttttgtcctccaaatttaattggcgatgaccaagttggaata
actggcgtggccttctcaaatcagagtgagcttctggtttcatacaatgatgaatttatc
tatttgtttactcaggatatgggattgggtcctaaccctgtgccttcttctccattgtct
actgggagtgatgctagtgaaatggcacctggtcatccctcaccttcatcaactatggat
gtcggtgatatagttactccccaagtttacaaggggcacaaaaattgtgtgacagtaaaa
ggtgtggacttctttgggccaaattgtgaatatgtggtcagtgggtcagactgtggtcga
atattcatttggaagaaaaagggtggagagctcatccatgtcatgaaagcagacaagcac
gtggtaaactgtattgagcctcatcctcactccatagtgcttgcaagcagtggaattgaa
agtgacattaagatatggaccccggaggctattgagagagctactttgcctgtaaagatt
gaacagttcgaaccaaaggccaggggctggatgcactctgttatttcactggatgacctg
atgatgcaattgttttcattgcaaaggcagaggaccgattatgatccagagcatgttggt
gaaagcttagctgcagatcgggaacttagagagcttttattaacattcaatgccaacggt
gacacatcttcggatgcaggagaagggccttaa
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